RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 OR7A17O14581 309 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 MTRF1O75570 445 aaKnown RBP9.13□□□□□ -0.95
NECAP1-201ENST00000339754 TSPAN12O95859 305 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 FABP3P05413 133 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 FHP07954 510 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF250P15622 560 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 HOXB9P17482 250 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-201ENST00000339754 PTPN6P29350 595 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 HOXC13P31276 330 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 PXNP49023 591 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-201ENST00000339754 DSC2Q02487 901 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 EIF4HQ15056 248 aaKnown RBP9.13□□□□□ -0.95
NECAP1-201ENST00000339754 GPR19Q15760 415 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 LRIF1Q5T3J3 769 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 SAXO2Q658L1 398 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF367Q7RTV3 350 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 C2orf69Q8N8R5 385 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-201ENST00000339754 OR4F6Q8NGB9 312 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 OR13C4Q8NGS5 318 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 RNF34Q969K3 372 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 ZSCAN5AQ9BUG6 496 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 TAPBPLQ9BX59 468 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 DPY30Q9C005 99 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF408Q9H9D4 720 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 NT5MQ9NPB1 228 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 AASDHPPTQ9NRN7 309 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 TAS2R13Q9NYV9 303 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 COQ3Q9NZJ6 369 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 HSPB11Q9Y547 144 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 ARL5AQ9Y689 179 aa9.13□□□□□ -0.95
NECAP1-201ENST00000339754 GBF1Q92538 1859 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 LOC285095A0A1B0GVY8 99 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 H3BM21 787 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 AGRPO00253 132 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 WNT9AO14904 365 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 BET1O15155 118 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 VPS26AO75436 327 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 IL32P24001 234 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 RPL38P63173 70 aaKnown RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 ITKQ08881 620 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 MGAT3Q09327 533 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 ABHD18Q0P651 414 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 DCAF4L1Q3SXM0 396 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TIMM50Q3ZCQ8 353 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 MANEALQ5VSG8 457 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 RGMBQ6NW40 437 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 UBE2J2Q8N2K1 259 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 OR4L1Q8NH43 312 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 GPR152Q8TDT2 470 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 PMEPA1Q969W9 287 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TOE1Q96GM8 510 aaKnown RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 PPP3R2Q96LZ3 170 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 GPR21Q99679 349 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SYT17Q9BSW7 474 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 INPP5KQ9BT40 448 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 UBQLN1Q9UMX0 589 aaKnown RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 RWDD3Q9Y3V2 267 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 RALGAPA2Q2PPJ7 1873 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 HHLA1C9JL84 531 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 PLD2O14939 933 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TRIM3O75382 744 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 C1QCP02747 245 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 C9P02748 559 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SOX9P48436 509 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TGM4P49221 684 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TAF6P49848 677 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 RORCP51449 518 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SOX4Q06945 474 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SLC10A7Q0GE19 358 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SLC14A1Q13336 389 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 EIF4EBP2Q13542 120 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TATDN3Q17R31 274 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 C18orf21Q32NC0 220 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 ZBTB37Q5TC79 503 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SUSD1Q6UWL2 747 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 GALNT10Q86SR1 603 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 GPSM1Q86YR5 675 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 LIX1Q8N485 282 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 VANGL1Q8TAA9 524 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 LHFPL5Q8TAF8 219 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 TADA1Q96BN2 335 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 CDCA4Q9BXL8 241 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 KCNH6Q9H252 994 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 KCNN2Q9H2S1 579 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 MIXL1Q9H2W2 232 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 NXF3Q9H4D5 531 aaKnown RBP9.12□□□□□ -0.95
NECAP1-201ENST00000339754 REEP1Q9H902 201 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SP110Q9HB58 689 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 CRTAC1Q9NQ79 661 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 CATSPERZQ9NTU4 200 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 CD274Q9NZQ7 290 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 ALG5Q9Y673 324 aa9.12□□□□□ -0.95
NECAP1-201ENST00000339754 SMIM28A0A1B0GU29 152 aa9.11□□□□□ -0.95
NECAP1-201ENST00000339754 FGF10O15520 208 aaPredicted RBP9.11□□□□□ -0.95
NECAP1-201ENST00000339754 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms