RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SMRP1Q8NCR6 262 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 RBM4BQ9BQ04 359 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 RPP25Q9BUL9 199 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 RBM4Q9BWF3 364 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 OSBPL6Q9BZF3 934 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 PREBQ9HCU5 417 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 FBXO10Q9UK96 956 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 H3BQ06 376 aaPredicted RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 ZNF701M0R085 212 aaPredicted RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 CISD3P0C7P0 127 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 MPC1LP0DKB6 136 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 HOXB9P17482 250 aaPredicted RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 CD22P20273 847 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 CD247P20963 164 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 AGXTP21549 392 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 CRHBPP24387 322 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 SLC6A11P48066 632 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 COL19A1Q14993 1142 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 PDGFRLQ15198 375 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 PLEKHS1Q5SXH7 462 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 TTC23Q5W5X9 447 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 SYT12Q8IV01 421 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 YAF2Q8IY57 180 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 ZCCHC7Q8N3Z6 543 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 SVOPLQ8N434 492 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 LILRA3Q8N6C8 439 aaPredicted RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 PNPT1Q8TCS8 783 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 PYURFQ96I23 114 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 REXO4Q9GZR2 422 aaKnown RBP15.79■□□□□ 0.12
LITAF-201ENST00000339430 FAM83DQ9H4H8 585 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 VNN3Q9NY84 501 aa15.79■□□□□ 0.12
LITAF-201ENST00000339430 EIF3FO00303 357 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 SGTAO43765 313 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 POLR2EP19388 210 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 MAPK1P28482 360 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 KIR3DL1P43629 444 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 IRF8Q02556 426 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 MESP2Q0VG99 397 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 DMC1Q14565 340 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 CCSMST1Q4G0I0 132 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ARSIQ5FYB1 569 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 XKR6Q5GH73 641 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 BROXQ5VW32 411 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ADNP2Q6IQ32 1131 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 KIAA0907Q7Z7F0 614 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 GALNT5Q7Z7M9 940 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 OR5K1Q8NHB7 308 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 TESCQ96BS2 214 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 MED8Q96G25 268 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 PANX1Q96RD7 426 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 BARD1Q99728 777 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 FADS2P1A8MWK0 482 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 E7EQ34 232 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 FPGTO14772 594 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 LEFTY1O75610 366 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 DIRAS1O95057 198 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 CPSF4O95639 269 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 CPNE6O95741 557 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 TTKP33981 857 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 PREPP48147 710 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 POLR2LP62875 67 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 IL1RL1Q01638 556 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ABHD18Q0P651 414 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 GAB4Q2WGN9 574 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 XAF1Q6GPH4 301 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ETFBKMTQ8IXQ9 262 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ZNF366Q8N895 744 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 CHDHQ8NE62 594 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 BPIFB6Q8NFQ5 453 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 OR52E4Q8NGH9 312 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 ZNF420Q8TAQ5 688 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 ELSPBP1Q96BH3 223 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 THAP11Q96EK4 314 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 HSPBAP1Q96EW2 488 aa15.78■□□□□ 0.12
LITAF-201ENST00000339430 REXO5Q96IC2 774 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 RIOK2Q9BVS4 552 aaKnown RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 FAF1Q9UNN5 650 aaPredicted RBP15.78■□□□□ 0.12
LITAF-201ENST00000339430 A0A0J9YVX5 310 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 LOC100130705A0A1B0GUX0 176 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 TTC34A8MYJ7 566 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 WNT9AO14904 365 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 MITFO75030 526 aaPredicted RBP15.77■□□□□ 0.12
LITAF-201ENST00000339430 JUPP14923 745 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 PRPH2P23942 346 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 CD47Q08722 323 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 GTF2H3Q13889 308 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 UGT8Q16880 541 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.77■□□□□ 0.12
LITAF-201ENST00000339430 C6orf141Q5SZD1 244 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 ZDHHC20Q5W0Z9 365 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 ZNF621Q6ZSS3 439 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 ZDHHC21Q8IVQ6 265 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 CLECL1Q8IZS7 167 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 PJA1Q8NG27 643 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 OR13F1Q8NGS4 319 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 DNAJB8Q8NHS0 232 aa15.77■□□□□ 0.12
LITAF-201ENST00000339430 NELL1Q92832 810 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms