RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CARS2Q9HA77 564 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 HEATR5BQ9P2D3 2071 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SNRNP200O75643 2136 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TRBV23OR9-2A0A075B6M9 112 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 H0YIV9 168 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TXNDC9O14530 226 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 AP1G1O43747 822 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 RNGTTO60942 597 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 KLHL18O94889 574 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 KCNH1O95259 989 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 EML2O95834 649 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TBX6O95947 436 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 DNTTP04053 509 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LAMP1P11279 417 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MYCLP1P12525 358 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PWP1Q13610 501 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 HKDC1Q2TB90 917 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM259Q4ZIN3 620 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 GRHL2Q6ISB3 625 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CAPN13Q6MZZ7 669 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ARMCX6Q7L4S7 300 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LINC01555Q8NAE3 123 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 WDR48Q8TAF3 677 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PNPT1Q8TCS8 783 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ATL1Q8WXF7 558 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 INSM2Q96T92 566 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 GABRG3Q99928 467 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MACROD1Q9BQ69 325 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SGPP1Q9BX95 441 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C1QTNF2Q9BXJ5 285 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PAIP1Q9H074 479 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PRDM8Q9NQV8 689 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C6orf203Q9P0P8 240 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SCHIP1Q9P0W5 487 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ACTR3BQ9P1U1 418 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TAC3Q9UHF0 121 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CD207Q9UJ71 328 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SUFUQ9UMX1 484 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 EXO1Q9UQ84 846 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LRCH1Q9Y2L9 728 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 DTNAQ9Y4J8 743 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 DENND4AQ7Z401 1863 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ARHGEF17Q96PE2 2063 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MYOCOSA0A1B0GUC4 107 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 TCRBV5S2A0A599 114 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 GABRR3A8MPY1 467 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 H7BY64 318 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 RTCAO00442 366 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PPM1DO15297 605 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PLRG1O43660 514 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PIM1P11309 404 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 HOXB3P14651 431 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF26P17031 533 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 AK4P27144 223 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC7A1P30825 629 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MTHFRP42898 656 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 CLNS1AP54105 237 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 WNT3P56703 355 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 CYP4F2P78329 520 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 FOLH1Q04609 750 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 C6orf52Q5T4I8 152 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 GLYATQ6IB77 296 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ZFP1Q6P2D0 407 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 Q6ZS52 159 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 RNF165Q6ZSG1 346 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 VN1R5Q7Z5H4 357 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 GALNT10Q86SR1 603 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PDZD3Q86UT5 571 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SYT12Q8IV01 421 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ADGRG5Q8IZF4 528 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 BIRC7Q96CA5 298 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SIPA1Q96FS4 1042 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF514Q96K75 400 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PRAP1Q96NZ9 151 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 UHRF1Q96T88 793 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 CENPKQ9BS16 269 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 REXO4Q9GZR2 422 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 FGF22Q9HCT0 170 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 IMP3Q9NV31 184 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 UBAP1Q9NZ09 502 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 GPSM3Q9Y4H4 160 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 DHRS12A0PJE2 317 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PIPSLA2A3N6 862 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SAC3D1A6NKF1 404 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SOCS2O14508 198 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 SCN2BO60939 215 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 IL6P05231 212 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 NDUFV2P19404 249 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 S100A3P33764 101 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 RPS21P63220 83 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ACSM2AQ08AH3 577 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PPP1R8Q12972 351 aaKnown RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 MAD2L1Q13257 205 aaPredicted RBP7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 NKG7Q16617 165 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 PRSS53Q2L4Q9 553 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 TBCELQ5QJ74 424 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 ACSM2BQ68CK6 577 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 LCN8Q6JVE9 175 aa7.13□□□□□ -1.27
SRFBP1-201ENST00000339397 TTC23LQ6PF05 361 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms