RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 C2orf42Q9NWW7 574 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 COLQQ9Y215 455 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 PCM1Q15154 2024 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 PRSS38A1L453 326 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 GBAP04062 536 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 C8BP07358 591 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 S100A3P33764 101 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 RAE1P78406 368 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 ZNF33BQ06732 778 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 RIMKLAQ8IXN7 391 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 LINC01555Q8NAE3 123 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 OR7A2PQ8NGA2 310 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 SLCO4A1Q96BD0 722 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 NAF1Q96HR8 494 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 BMFQ96LC9 184 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 PKP2Q99959 881 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 OR51B5Q9H339 312 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 RMI1Q9H9A7 625 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 CUEDC1Q9NWM3 386 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 SLC25A37Q9NYZ2 338 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 CROCCQ5TZA2 2017 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 ARPC2O15144 300 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 STAMBPO95630 424 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 GSNP06396 782 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 PAGE2BQ5JRK9 111 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 ANKRD26P1Q6NSI1 321 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 LCTLQ6UWM7 567 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 MSRB3Q8IXL7 192 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 SETD7Q8WTS6 366 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 OR1E3Q8WZA6 343 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 TSACCQ96A04 125 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 C11orf24Q96F05 449 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 FCRL1Q96LA6 429 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 INPP5KQ9BT40 448 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 IKZF5Q9H5V7 419 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 SCHIP1Q9P0W5 487 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 PRSS51A0A1B0GVH4 220 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 TCRBV3S1A0A5B6 114 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 FPGTO14772 594 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 ERGP11308 486 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 IDSP22304 550 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 HIST2H2ACQ16777 129 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 HIST2H2AA3Q6FI13 130 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 OR4F3Q6IEY1 312 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 LAS2Q8IYD9 372 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 REPS1Q96D71 796 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 ZNF184Q99676 751 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 PNMA8BQ9ULN7 279 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 RUVBL1Q9Y265 456 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 AP4S1Q9Y587 144 aa21.6■■□□□ 1.05
PDLIM2-203ENST00000339162 TMEM265A0A087WTH1 108 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 HSD3B1P14060 373 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 GLULP15104 373 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 HSD3B2P26439 372 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 AK4P27144 223 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CLNS1AP54105 237 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 OR4D2P58180 307 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 BNIP2Q12982 314 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 KRT33BQ14525 404 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 OR2T34Q8NGX1 318 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CANT1Q8WVQ1 401 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 AURKBQ96GD4 344 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 ANKRD27Q96NW4 1050 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 MYCBPQ99417 103 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 EHD1Q9H4M9 534 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 DMRT3Q9NQL9 472 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 RIMS3Q9UJD0 308 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 KLHL33A6NCF5 533 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 ANXA4P09525 319 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 SRFP11831 508 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 EEFSECP57772 596 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 RBBP5Q15291 538 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CYP2A13Q16696 494 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 C17orf64Q86WR6 236 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CCL4L1Q8NHW4 92 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CHTF18Q8WVB6 975 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CAMK1GQ96NX5 476 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 THUMPD3Q9BV44 507 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 SERHLQ9NQF3 203 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 C6orf203Q9P0P8 240 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 CA14Q9ULX7 337 aa21.59■■□□□ 1.05
PDLIM2-203ENST00000339162 C15orf38-AP3S2A0A0A6YYH1 394 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 A0A1W2PPV9 198 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 PRR19A6NJB7 356 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 LRRC72A6NJI9 287 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 EML2O95834 649 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 HNRNPA2B1P22626 353 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 CDKN2CP42773 168 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 TDGQ13569 410 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 ARHGAP19Q14CB8 494 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 UGT8Q16880 541 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 HKDC1Q2TB90 917 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 GRAMD1BQ3KR37 738 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 ANO7Q6IWH7 933 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 TMIGD1Q6UXZ0 262 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 ARPINQ7Z6K5 226 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 TRIM69Q86WT6 500 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 FRMD1Q8N878 549 aa21.58■■□□□ 1.05
PDLIM2-203ENST00000339162 JPH3Q8WXH2 748 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms