RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 CCNB1IP1Q9NPC3 277 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 NEU3Q9UQ49 428 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 ERVK-11Q9UQG0 969 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 UGT2A1Q9Y4X1 527 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SLC35F4A4IF30 521 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 FAM227AF5H4B4 570 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 CCNDBP1O95273 360 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 TGM4P49221 684 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 FCGRTP55899 365 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 RNASE12Q5GAN4 147 aaKnown RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 XKR4Q5GH76 650 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 C1QTNF12Q5T7M4 302 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 C1orf52Q8N6N3 182 aaKnown RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 NACC2Q96BF6 587 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 ART5Q96L15 291 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 TRIT1Q9H3H1 467 aaKnown RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 RPRD1BQ9NQG5 326 aaKnown RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 ANKDD1BA6NHY2 528 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 J3KTA2 159 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SMAD6O43541 496 aaKnown RBP13.72□□□□□ -0.21
PCDH8-201ENST00000338862 KIAA0513O60268 411 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 CLDN11O75508 207 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SLC15A1P46059 708 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 MAPKAPK2P49137 400 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 PTPN5P54829 565 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 ABHD18Q0P651 414 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 TMPRSS11BQ86T26 416 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 RHOXF1Q8NHV9 184 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 MAF1Q9H063 256 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
PCDH8-201ENST00000338862 ZNF197O14709 1029 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 INHBBP09529 407 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ZNF24P17028 368 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 HTR7P34969 479 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 CRISP3P54108 245 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 RPS26P62854 115 aaKnown RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ALDH6A1Q02252 535 aaKnown RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 MAD2L1BPQ15013 274 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 SLC14A2Q15849 920 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 VMACQ2NL98 169 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ZNF362Q5T0B9 420 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 TNFAIP8L2Q6P589 184 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 SBSNQ6UWP8 590 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 DEPDC4Q8N2C3 294 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ADAMTS16Q8TE57 1224 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 PHF21AQ96BD5 680 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 C1GALT1C1Q96EU7 318 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 LAMA2P24043 3122 aaKnown RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 A0A0G2JN53 185 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 WWP2O00308 870 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 CPNE3O75131 537 aaKnown RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 TGFB1P01137 390 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 EPOP01588 193 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 CAPNS1P04632 268 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 NOXRED1Q6NXP6 359 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ZNF366Q8N895 744 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 ARL14EPQ8N8R7 260 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 GLB1L3Q8NCI6 653 aaPredicted RBP13.71□□□□□ -0.21
PCDH8-201ENST00000338862 SCAMP4Q969E2 229 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 DOK1Q99704 481 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 PTPN18Q99952 460 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 HEBP1Q9NRV9 189 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 TRPC4Q9UBN4 977 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 CLEC4AQ9UMR7 237 aa13.71□□□□□ -0.21
PCDH8-201ENST00000338862 C2orf78A6NCI8 922 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 UPK1BO75841 260 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 TSPAN12O95859 305 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 STATHP02808 62 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ZNF865P0CJ78 1059 aaPredicted RBP13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ETFAP13804 333 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 SOX3P41225 446 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.22
PCDH8-201ENST00000338862 SNRPD2P62316 118 aaKnown RBP13.71□□□□□ -0.22
PCDH8-201ENST00000338862 METTL4Q8N3J2 472 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 PARP16Q8N5Y8 322 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ENKURQ8TC29 256 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 SLC39A13Q96H72 371 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 DIRAS2Q96HU8 199 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 TMEM246Q9BRR3 403 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 DUSP26Q9BV47 211 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 MIEF1Q9NQG6 463 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ANKMY1Q9P2S6 941 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 TMED5Q9Y3A6 229 aa13.71□□□□□ -0.22
PCDH8-201ENST00000338862 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 SOBPA7XYQ1 873 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 AP3D1O14617 1153 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 TAPBPO15533 448 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 HPRP00739 348 aa13.7□□□□□ -0.22
PCDH8-201ENST00000338862 TSPAN19P0C672 248 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms