RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ERVMER34-1Q9H9K5 563 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MRGBPQ9NV56 204 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 AIG1Q9NVV5 245 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 C1orf109Q9NX04 203 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 GPR45Q9Y5Y3 372 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 IGKV1-8A0A0C4DH67 115 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 OR6C74A6NCV1 312 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MAGEB17A8MXT2 336 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 LMO7DNF2Z398 122 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SH3BGRLO75368 114 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RSL1D1O76021 490 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ANXA6P08133 673 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 IDO1P14902 403 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BNIP3Q12983 259 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CSTF3Q12996 717 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RBBP5Q15291 538 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 AGKQ53H12 422 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 IL23RQ5VWK5 629 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 TMIGD1Q6UXZ0 262 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 TMEM26Q6ZUK4 368 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BMP8AQ7Z5Y6 402 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ADCK2Q7Z695 626 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZFAND4Q86XD8 727 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SNX32Q86XE0 403 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MIER2Q8N344 545 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 OR2L3Q8NG85 312 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 OR4K1Q8NGD4 311 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 OR9I1Q8NGQ6 314 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 OR10G6Q8NH81 332 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC7A6OSQ96CW6 309 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZC3H10Q96K80 434 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZSCAN32Q9NX65 697 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CCDC167Q9P0B6 97 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SUSD2Q9UGT4 822 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 POLR3HQ9Y535 204 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 FEZF1A0PJY2 475 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SP9P0CG40 484 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 POLR2CP19387 275 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 GPX3P22352 226 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PRPH2P23942 346 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CXCR2P25025 360 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PRDX6P30041 224 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CMPK1P30085 196 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RPS13P62277 151 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CSNK1G2P78368 415 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ABATP80404 500 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RINLQ6ZS11 566 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 GK5Q6ZS86 529 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SDR16C5Q8N3Y7 309 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ARL14Q8N4G2 192 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 UBE2E3Q969T4 207 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CMTM7Q96FZ5 175 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 APIPQ96GX9 242 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC45A3Q96JT2 553 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BRF2Q9HAW0 419 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC6A20Q9NP91 592 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SDR39U1Q9NRG7 319 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NOP53Q9NZM5 478 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CACNA1EQ15878 2313 aa14.18□□□□□ -0.14
CDK5RAP3-201ENST00000338399 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 B2RBV5 119 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PPM1DO15297 605 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NOBOXO60393 691 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CCNDBP1O95273 360 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ETHE1O95571 254 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 THRAP10827 490 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 G6PDP11413 515 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HSD3B1P14060 373 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HSD3B2P26439 372 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CNR2P34972 360 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RASSF2P50749 326 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 REEP5Q00765 189 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MAD2L1Q13257 205 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KIAA0040Q15053 153 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ANGPT1Q15389 498 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SMU1Q2TAY7 513 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KIAA1614Q5VZ46 1190 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SYT12Q8IV01 421 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PLD3Q8IV08 490 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RP9Q8TA86 221 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC22A18Q96BI1 424 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KLHL29Q96CT2 875 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ELF4Q99607 663 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 DPH7Q9BTV6 452 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 TBC1D10AQ9BXI6 508 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BRINP2Q9C0B6 783 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 VPS29Q9UBQ0 182 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 EIF3LQ9Y262 564 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KLHL20Q9Y2M5 609 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ADAMTS9Q9P2N4 1935 aa14.17□□□□□ -0.14
CDK5RAP3-201ENST00000338399 GSAPA4D1B5 854 aa14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NPIPB8E9PQR5 432 aa14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NRP2O60462 931 aa14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HNRNPCL1O60812 293 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 EZRP15311 586 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PTPN4P29074 926 aa14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ACTN3Q08043 901 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SIM2Q14190 667 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms