RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TSFMP43897 325 aaKnown RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 AVPR1BP47901 424 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 PER3P56645 1201 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 AP2B1P63010 937 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 ARG2P78540 354 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 MFAP5Q13361 173 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 CTBP1Q13363 440 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 GBX1Q14549 363 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 NDUFA9Q16795 377 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 CRB2Q5IJ48 1285 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 GARNL3Q5VVW2 1013 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 ATG9BQ674R7 924 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 B3GNTL1Q67FW5 361 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 CENPUQ71F23 418 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 MAMDC2Q7Z304 686 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 CAND1Q86VP6 1230 aaKnown RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 KCNMB4Q86W47 210 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 LRRC8AQ8IWT6 810 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 REXO1L1PQ8IX06 675 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 PALM2Q8IXS6 379 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 LMNTD2Q8IXW0 634 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 PRELID2Q8N945 189 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 ST6GALNAC3Q8NDV1 305 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 GABPB2Q8TAK5 448 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 DRC3Q9H069 523 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 MKKSQ9NPJ1 570 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 C20orf96Q9NUD7 363 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 GALPQ9UBC7 116 aa10.15□□□□□ -0.78
CAPN3-202ENST00000337571 ERRFI1Q9UJM3 462 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-202ENST00000337571 USP9XQ93008 2570 aaPredicted RBP10.15□□□□□ -0.79
CAPN3-202ENST00000337571 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 WIPF3A6NGB9 483 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 IDSB3KWA1 339 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 SLC16A8O95907 504 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 ERGP11308 486 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 ENO3P13929 434 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 EDN3P14138 238 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 HRH2P25021 359 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 SLC26A3P40879 764 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 MAGEA6P43360 314 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 CLCN7P51798 805 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 YBX1P67809 324 aaKnown RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 RELAQ04206 551 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 LONRF1Q17RB8 773 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 HKDC1Q2TB90 917 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PRTGQ2VWP7 1150 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 UGT3A1Q6NUS8 523 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 CCDC137Q6PK04 289 aaKnown RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 FAM180AQ6UWF9 173 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PAQR7Q86WK9 346 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 DTWD1Q8N5C7 304 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PPFIBP2Q8ND30 876 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 MCUQ8NE86 351 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 OR1N1Q8NGS0 311 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 SUN3Q8TAQ9 357 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 MCOLN3Q8TDD5 553 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 GRHL3Q8TE85 626 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 ZNF480Q8WV37 535 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 FAR1Q8WVX9 515 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 METTL21AQ8WXB1 218 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 ASB11Q8WXH4 323 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 KCNJ9Q92806 393 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 C8orf44Q96CB5 159 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PBKQ96KB5 322 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 MAGEB10Q96LZ2 347 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 C10orf90Q96M02 699 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 BARD1Q99728 777 aaKnown RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 FBXO6Q9NRD1 293 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 C14orf105Q9NVL8 296 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PTGFRNQ9P2B2 879 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 PCYOX1Q9UHG3 505 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 RUVBL1Q9Y265 456 aaKnown RBP10.14□□□□□ -0.79
CAPN3-202ENST00000337571 NTNG1Q9Y2I2 539 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 DHRS7Q9Y394 339 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 JRKLQ9Y4A0 524 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 CSAG2Q9Y5P2 127 aa10.14□□□□□ -0.79
CAPN3-202ENST00000337571 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 TEX15Q9BXT5 2789 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 IGLV3-12A0A075B6K2 115 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 A0A0A6YYC8 382 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 PABPN1LA6NDY0 278 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 E7ENX8 843 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 H7BY64 318 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 I3L1I5 382 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 GFYI3L273 518 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 LRRTM2O43300 516 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 NRP2O60462 931 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 KLHL18O94889 574 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 MED26O95402 600 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 LDLRP01130 860 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 SERPINA7P05543 415 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 COILP38432 576 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 SKIV2L2P42285 1042 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 TAP2Q03519 686 aa10.13□□□□□ -0.79
CAPN3-202ENST00000337571 EEF1A2Q05639 463 aaKnown RBP10.13□□□□□ -0.79
CAPN3-202ENST00000337571 Q0VFX4 171 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms