RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 LSAMPQ13449 338 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ZNF385BQ569K4 471 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 C9orf50Q5SZB4 431 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 WASH2PQ6VEQ5 465 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 B3GNT6Q6ZMB0 384 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ZNF547Q8IVP9 402 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SLC44A2Q8IWA5 706 aaPredicted RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 BPIFB6Q8NFQ5 453 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 OR7G3Q8NG95 312 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 OR52J3Q8NH60 311 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 TSPEARQ8WU66 669 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SNX19Q92543 992 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 HAUS8Q9BT25 410 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 IFT80Q9P2H3 777 aaPredicted RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SLC23A2Q9UGH3 650 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 MOSPD1Q9UJG1 213 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 PCM1Q15154 2024 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 HELZP42694 1942 aaKnown RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 SMIM31A0A1B0GVY4 71 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 FEZF1A0PJY2 475 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 GABRR3A8MPY1 467 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 M0R129 80 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 FTH1P02794 183 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ALPLP05186 524 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 THRBP10828 461 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ZNF8P17098 575 aaPredicted RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 CD247P20963 164 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SLC19A1P41440 591 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 DAG1Q14118 895 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SLBPQ14493 270 aaKnown RBP eCLIP8.55□□□□□ -1.04
SNCA-201ENST00000336904 ZNF234Q14588 700 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 CTU2Q2VPK5 515 aaKnown RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 COX20Q5RI15 118 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 LDLRAP1Q5SW96 308 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 OLIG3Q7RTU3 272 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 TECPR1Q7Z6L1 1165 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 C11orf96Q7Z7L8 435 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 TMEM132CQ8N3T6 1108 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 OR8J3Q8NGG0 315 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 CHFRQ96EP1 664 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ABCG4Q9H172 646 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 FANCEQ9HB96 536 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 SERGEFQ9UGK8 458 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 DMTF1Q9Y222 760 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 PPIL1Q9Y3C6 166 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 CFAP54Q96N23 3096 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 A0A1W2PPW3 197 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 NPC1O15118 1278 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 PPM1DO15297 605 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 XYLBO75191 536 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 NME6O75414 186 aaPredicted RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 SERPIND1P05546 499 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 GSTM1P09488 218 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CISD3P0C7P0 127 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CBSLP0DN79 551 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 JUPP14923 745 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ALDH4A1P30038 563 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 MAT2AP31153 395 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 FMO3P31513 532 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CBSP35520 551 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 LBX1P52954 281 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 WNT3P56703 355 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 VLDLRP98155 873 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 GSTM4Q03013 218 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 MAD2L1Q13257 205 aaPredicted RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 SMN1Q16637 294 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 PRSS53Q2L4Q9 553 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TMEM31Q5JXX7 168 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ERAP2Q6P179 960 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ABRAXAS1Q6UWZ7 409 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TRAM1L1Q8N609 369 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 MFSD2AQ8NA29 543 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 DDHD1Q8NEL9 900 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 UCN3Q969E3 161 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 MBOAT4Q96T53 435 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CCM2Q9BSQ5 444 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ZSCAN5AQ9BUG6 496 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CEP44Q9C0F1 390 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 OSGEPL1Q9H4B0 414 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ARMC7Q9H6L4 198 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 RASSF1Q9NS23 344 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 RSL24D1Q9UHA3 163 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 SLC8A2Q9UPR5 921 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ASF1AQ9Y294 204 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 COMMD3-BMI1R4GMX3 469 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TRBV5-3A0A0A0MS03 114 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 POP7O75817 140 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 SLCO2B1O94956 709 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 PCDH8O95206 1070 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ATE1O95260 518 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CATP04040 527 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 FCGR1AP12314 374 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 IL12RB1P42701 662 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CRATP43155 626 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 LSM3P62310 102 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 CREMQ03060 361 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms