RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 PDP1Q9P0J1 537 aaPredicted RBP17.26■□□□□ 0.35
IFFO1-201ENST00000336604 PCDHGA10Q9Y5H3 936 aa17.26■□□□□ 0.35
IFFO1-201ENST00000336604 M0QX08 132 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 SOD2P04179 222 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 INHAP05111 366 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 MAPK1P28482 360 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 SLC35A2P78381 396 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 NPTX1Q15818 432 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 VMACQ2NL98 169 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 DEPDC1Q5TB30 811 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 SYT12Q8IV01 421 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 FAM217AQ8IXS0 508 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 NDNFQ8TB73 568 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 ZFP90Q8TF47 636 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 C17orf50Q8WW18 174 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 RORBQ92753 470 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 VPS4AQ9UN37 437 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 INSL5Q9Y5Q6 135 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 PRRC2BQ5JSZ5 2229 aaKnown RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 SCN5AQ14524 2016 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 ZNF106Q9H2Y7 1883 aaKnown RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 PQBP1O60828 265 aaKnown RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 JRKO75564 520 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 FKBP9O95302 570 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 OLFM2O95897 454 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 UGT2B4P06133 528 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 C8GP07360 202 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 CD22P20273 847 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 PRPH2P23942 346 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 ARHGDIAP52565 204 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 EPHB3P54753 998 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 DUOXA1Q1HG43 343 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 CDKL4Q5MAI5 379 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 CAPN13Q6MZZ7 669 aaPredicted RBP17.25■□□□□ 0.35
IFFO1-201ENST00000336604 ZZZ3Q8IYH5 903 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 FAM9CQ8IZT9 166 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 UBE2FQ969M7 185 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 SUV39H2Q9H5I1 410 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 ZDHHC6Q9H6R6 413 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 PCDHGB1Q9Y5G3 927 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 GMPPBQ9Y5P6 360 aa17.25■□□□□ 0.35
IFFO1-201ENST00000336604 IGLV3-16A0A075B6K0 115 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 PABPN1LA6NDY0 278 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 YY2O15391 372 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SH3BGRLO75368 114 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 MYO1DO94832 1006 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 FABP3P05413 133 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 PRPS1L1P21108 318 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 HNMTP50135 292 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 TPTEP56180 551 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 WNT3P56703 355 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 MTAPQ13126 283 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 ADPRMQ3LIE5 342 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SLCO6A1Q86UG4 719 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 PTOV1Q86YD1 416 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SETD9Q8NE22 299 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 TM9SF3Q9HD45 589 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 HMG20AQ9NP66 347 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 RASSF1Q9NS23 344 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 DNAJC11Q9NVH1 559 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SAMHD1Q9Y3Z3 626 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 NRG2O14511 850 aaPredicted RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 NUAK1O60285 661 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SCN2BO60939 215 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GABARAPO95166 117 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 CPSF4O95639 269 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 C1SP09871 688 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GABRR2P28476 465 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 HOXA9P31269 272 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 KDELR2P33947 212 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SF3B4Q15427 424 aaKnown RBP eCLIP17.24■□□□□ 0.354e-6■■■■□ 20.6
IFFO1-201ENST00000336604 THOC7Q6I9Y2 204 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GAREM2Q75VX8 874 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 UTS2BQ765I0 119 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 TCAIMQ8N3R3 496 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 TTC29Q8NA56 475 aaPredicted RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 CSGALNACT1Q8TDX6 532 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 ECHDC3Q96DC8 303 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 HSH2DQ96JZ2 352 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GABARAPL1Q9H0R8 117 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 LSM7Q9UK45 103 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 BTBD3Q9Y2F9 522 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 TMEM98Q9Y2Y6 226 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 A0A1W2PQ67 120 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 MAGEB17A8MXT2 336 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 DNAJB5O75953 348 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 EPN2O95208 641 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 FADS2O95864 444 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 COX7A2P14406 83 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GJA1P17302 382 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 GSSP48637 474 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 MASP1P48740 699 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 PFN3P60673 137 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 VBP1P61758 197 aa17.24■□□□□ 0.35
IFFO1-201ENST00000336604 SNRPD1P62314 119 aaKnown RBP17.24■□□□□ 0.35
IFFO1-201ENST00000336604 HORMAD1Q86X24 394 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms