RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ARHGAP10A1A4S6 786 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 OR2A25A4D2G3 310 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SH3D21A4FU49 640 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ARHGEF33A8MVX0 844 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MEN1O00255 615 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 P2RY10O00398 339 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TNFRSF13BO14836 293 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LIN7AO14910 233 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 KPNA5O15131 536 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 B4GALT5O43286 388 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 KCNAB3O43448 404 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 DNAJB6O75190 326 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NIPSNAP2O75323 286 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PTBP3O95758 552 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 APOEP02649 317 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SRD5A1P18405 259 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MX2P20592 715 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CD247P20963 164 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MARK3P27448 753 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ADH6P28332 368 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CDK9P50750 372 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ATP4BP51164 291 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SH3BGRP55822 239 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC8A3P57103 927 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PHC1P78364 1004 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MRPS22P82650 360 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 HMGN5P82970 282 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ARF1P84077 181 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 POU4F1Q01851 419 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RHAGQ02094 409 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PAK1Q13153 545 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SGCGQ13326 291 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 GRM7Q14831 915 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RPS6KA1Q15418 735 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CALCRLQ16602 461 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TAZQ16635 292 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MAN2A1Q16706 1144 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 GPR33Q49SQ1 333 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CMPK2Q5EBM0 449 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 AGAP6Q5VW22 663 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 VASNQ6EMK4 673 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 OGFOD2Q6N063 350 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 USP17L6PQ6QN14 398 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC26A11Q86WA9 606 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PTOV1Q86YD1 416 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CREBRFQ8IUR6 639 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PYROXD2Q8N2H3 581 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC33Q8N5R6 958 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC5A8Q8N695 610 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 METTL13Q8N6R0 699 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FADS6Q8N9I5 356 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ADPRHL1Q8NDY3 354 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ZSWIM2Q8NEG5 633 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NEIL3Q8TAT5 605 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 HM13Q8TCT9 377 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TBCKQ8TEA7 893 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 HPDLQ96IR7 371 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CEP63Q96MT8 703 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TRAPPC9Q96Q05 1148 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TBCBQ99426 244 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PIMREGQ9BSJ6 248 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FGFBP2Q9BYJ0 223 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ROGDIQ9GZN7 287 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CLEC4MQ9H2X3 399 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PLK3Q9H4B4 646 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 THAP9Q9H5L6 903 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ARNT2Q9HBZ2 717 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC39A2Q9NP94 309 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC52A3Q9NQ40 469 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CCM2LQ9NUG4 571 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ING1Q9UK53 422 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CNOT11Q9UKZ1 510 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ISY1Q9ULR0 285 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LSM4Q9Y4Z0 139 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LRP12Q9Y561 859 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LOC102725191A0A1B0GVB3 256 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 TCRBV5S1A1TA0A578 114 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SLC22A23A1A5C7 686 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 A8MXE2 369 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 F5H5T6 163 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 RPL36A-HNRNPH2H7BZ11 118 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CBX4O00257 560 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ACOX3O15254 700 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PIN1P1O15428 100 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ERLIN1O75477 346 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ATP1A1P05023 1023 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NT5EP21589 574 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 USF1P22415 310 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 FASP25445 335 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 LMO2P25791 158 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PRLHRP49683 370 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF133P52736 654 aaPredicted RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PROK1P58294 105 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 SNRPNP63162 240 aaKnown RBP1.42□□□□□ -2.18
LINC00643-201ENST00000334389 CDKL1Q00532 357 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 PLAURQ03405 335 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 WASHC5Q12768 1159 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 NCOA4Q13772 614 aa1.42□□□□□ -2.18
LINC00643-201ENST00000334389 DBN1Q16643 649 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms