RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 C11orf74Q86VG3 221 aa22.4■■□□□ 1.18
TSEN54-201ENST00000333213 ADGRF3Q8IZF5 1079 aa22.4■■□□□ 1.18
TSEN54-201ENST00000333213 OR7G3Q8NG95 312 aa22.4■■□□□ 1.18
TSEN54-201ENST00000333213 POT1Q9NUX5 634 aa22.4■■□□□ 1.18
TSEN54-201ENST00000333213 SPASTQ9UBP0 616 aa22.4■■□□□ 1.18
TSEN54-201ENST00000333213 OR5K4A6NMS3 321 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 AQP9O43315 295 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 VIPP01282 170 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 LBPP18428 481 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 DIO3P55073 304 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 KLF10Q13118 480 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 SLBPQ14493 270 aaKnown RBP eCLIP22.39■■□□□ 1.18
TSEN54-201ENST00000333213 RFTN2Q52LD8 501 aaPredicted RBP22.39■■□□□ 1.18
TSEN54-201ENST00000333213 OGFOD2Q6N063 350 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 ZC3H10Q96K80 434 aaKnown RBP22.39■■□□□ 1.18
TSEN54-201ENST00000333213 MAGEB10Q96LZ2 347 aaPredicted RBP22.39■■□□□ 1.18
TSEN54-201ENST00000333213 OR6C2Q9NZP2 312 aa22.39■■□□□ 1.18
TSEN54-201ENST00000333213 VPS4BO75351 444 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 PIAS2O75928 621 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 SHMT2P34897 504 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 PRDX1Q06830 199 aaKnown RBP22.39■■□□□ 1.17
TSEN54-201ENST00000333213 C17orf64Q86WR6 236 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 TRIM48Q8IWZ4 208 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 ABHD11Q8NFV4 315 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 MTERF1Q99551 399 aaKnown RBP22.39■■□□□ 1.17
TSEN54-201ENST00000333213 PCBD2Q9H0N5 130 aa22.39■■□□□ 1.17
TSEN54-201ENST00000333213 STX18Q9P2W9 335 aaKnown RBP22.39■■□□□ 1.17
TSEN54-201ENST00000333213 PIPSLA2A3N6 862 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 NVLO15381 856 aaKnown RBP22.38■■□□□ 1.17
TSEN54-201ENST00000333213 CHRM5P08912 532 aaPredicted RBP22.38■■□□□ 1.17
TSEN54-201ENST00000333213 PAX7P23759 505 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 SLC34A1Q06495 639 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 NR6A1Q15406 480 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 SHBQ15464 509 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 ZNF761Q86XN6 746 aaPredicted RBP22.38■■□□□ 1.17
TSEN54-201ENST00000333213 GKN2Q86XP6 184 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 ZBTB44Q8NCP5 570 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 EFCAB11Q9BUY7 163 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 ERVMER34-1Q9H9K5 563 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 PFDN4Q9NQP4 134 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 FSCN3Q9NQT6 498 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 RIC8BQ9NVN3 520 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 PCDHB11Q9Y5F2 797 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 TMEM131Q92545 1883 aa22.38■■□□□ 1.17
TSEN54-201ENST00000333213 CACNA1EQ15878 2313 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 LMO7DNF2Z398 122 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 H7BY64 318 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SLC28A1O00337 649 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 NRP2O60462 931 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 PSMG1O95456 288 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SP9P0CG40 484 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 BNIP3Q12983 259 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 TEAD4Q15561 434 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 CCDC6Q16204 474 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 AP5B1Q2VPB7 878 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 DEFB133Q30KQ1 61 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 ATP6AP1LQ52LC2 224 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 IRGCQ6NXR0 463 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 RINLQ6ZS11 566 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 LAS2Q8IYD9 372 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 FLVCR1-AS1Q8TAF5 88 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 ZFPM2Q8WW38 1151 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 PIGKQ92643 395 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SPDL1Q96EA4 605 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SLC45A3Q96JT2 553 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 PRAP1Q96NZ9 151 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 C1orf50Q9BV19 199 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SRMSQ9H3Y6 488 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 PCDHGA11Q9Y5H2 935 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 SERTM1A2A2V5 107 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 RGS14O43566 566 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 NOBOXO60393 691 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 GNSP15586 552 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 MAZP56270 477 aaKnown RBP22.37■■□□□ 1.17
TSEN54-201ENST00000333213 HHEXQ03014 270 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 KIAA0040Q15053 153 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 PLCL1Q15111 1095 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 MUM1Q2TAK8 710 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 MED27Q6P2C8 311 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 OR4K1Q8NGD4 311 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 HUS1BQ8NHY5 278 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 LRCH1Q9Y2L9 728 aa22.37■■□□□ 1.17
TSEN54-201ENST00000333213 WDR87Q6ZQQ6 2873 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 MAGEB17A8MXT2 336 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 KDM1AO60341 852 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 ETHE1O95571 254 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 PIK3R1P27986 724 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 ERVK-8P63133 956 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 KLC1Q07866 573 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 DDX39BQ13838 428 aaKnown RBP22.36■■□□□ 1.17
TSEN54-201ENST00000333213 ZNF423Q2M1K9 1284 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 DNAL1Q4LDG9 190 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 PEAR1Q5VY43 1037 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-201ENST00000333213 SLC25A45Q8N413 288 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 POU5F2Q8N7G0 328 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 FNDC5Q8NAU1 212 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 OR2L3Q8NG85 312 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 OR9I1Q8NGQ6 314 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 C1orf21Q9H246 121 aa22.36■■□□□ 1.17
TSEN54-201ENST00000333213 SLC6A20Q9NP91 592 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms