RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PRKCDQ05655 676 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 CBLL1Q75N03 491 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 ZNF598Q86UK7 904 aaKnown RBP22.89■■□□□ 1.26
TSKU-201ENST00000333090 PTOV1Q86YD1 416 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 ZNF675Q8TD23 568 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 MYDGFQ969H8 173 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 NDEL1Q9GZM8 345 aa22.89■■□□□ 1.26
TSKU-201ENST00000333090 CPSF4O95639 269 aaKnown RBP22.89■■□□□ 1.25
TSKU-201ENST00000333090 ATXN7L2Q5T6C5 722 aaPredicted RBP22.89■■□□□ 1.25
TSKU-201ENST00000333090 C17orf99Q6UX52 265 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 PAF1Q8N7H5 531 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 KBTBD8Q8NFY9 601 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 ZIC5Q96T25 663 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 CENPOQ9BU64 300 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 ARL15Q9NXU5 204 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 PCDHGB6Q9Y5F9 930 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 PIKFYVEQ9Y2I7 2098 aa22.89■■□□□ 1.25
TSKU-201ENST00000333090 GAPDHSO14556 408 aaPredicted RBP22.88■■□□□ 1.25
TSKU-201ENST00000333090 HSMCR30P0CW71 290 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 RPS3P23396 243 aaKnown RBP eCLIP22.88■■□□□ 1.25
TSKU-201ENST00000333090 AQP1P29972 269 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 IDH2P48735 452 aaKnown RBP22.88■■□□□ 1.25
TSKU-201ENST00000333090 NFATC2Q13469 925 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 DUOXA1Q1HG43 343 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 GPRC6AQ5T6X5 926 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 NLGN4XQ8N0W4 816 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 OR6K2Q8NGY2 324 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 GGHQ92820 318 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 TTPALQ9BTX7 342 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 MARCH7Q9H992 704 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 GPR83Q9NYM4 423 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 A3GALT2U3KPV4 340 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 CD160O95971 181 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.88■■□□□ 1.25
TSKU-201ENST00000333090 DNAJC22Q8N4W6 341 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 CDC26Q8NHZ8 85 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 PLXNA4Q9HCM2 1894 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 SSX4O60224 188 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 KRT8P05787 483 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 ANXA5P08758 320 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 STSP08842 583 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 RRM2P31350 389 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 FAM9CQ8IZT9 166 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 NXF2Q9GZY0 626 aaKnown RBP22.88■■□□□ 1.25
TSKU-201ENST00000333090 RAD18Q9NS91 495 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 SPASTQ9UBP0 616 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 DNMT3LQ9UJW3 386 aa22.88■■□□□ 1.25
TSKU-201ENST00000333090 CLCA1A8K7I4 914 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 MAGEB17A8MXT2 336 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 KMOO15229 486 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 CDK1P06493 297 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 ATP5C1P36542 298 aaKnown RBP22.87■■□□□ 1.25
TSKU-201ENST00000333090 DEFA1P59665 94 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 DEFA3P59666 94 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 DUSP4Q13115 394 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 ADGRG2Q8IZP9 1017 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 RNF175Q8N4F7 328 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 PSD4Q8NDX1 1056 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 NUAK2Q9H093 628 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 SLC32A1Q9H598 525 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 EHD3Q9NZN3 535 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 SNX6Q9UNH7 406 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 FCF1Q9Y324 198 aaKnown RBP22.87■■□□□ 1.25
TSKU-201ENST00000333090 GJB5O95377 273 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 ITGALP20701 1170 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 MAPK1P28482 360 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 RPIAP49247 311 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 CRISP3P54108 245 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 RHOAP61586 193 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 DSC1Q08554 894 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 CRHR2Q13324 411 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 ARMCX4Q5H9R4 360 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 SPANXN2Q5MJ10 180 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 ERICH5Q6P6B1 374 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 CLECL1Q8IZS7 167 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 PGBD3Q8N328 593 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 GABARAPL3Q9BY60 117 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 CRLS1Q9UJA2 301 aa22.87■■□□□ 1.25
TSKU-201ENST00000333090 MTMR11A4FU01 709 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 DUSP11O75319 330 aaKnown RBP22.86■■□□□ 1.25
TSKU-201ENST00000333090 PTHP01270 115 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 APOA1P02647 267 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 ASGR1P07306 291 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 GPX2P18283 190 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 ZXDBP98169 803 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 CMTM7Q96FZ5 175 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 FEVQ99581 238 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 EMILIN2Q9BXX0 1053 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 CEP44Q9C0F1 390 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 IL26Q9NPH9 171 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 CCDC59Q9P031 241 aaKnown RBP22.86■■□□□ 1.25
TSKU-201ENST00000333090 PEX16Q9Y5Y5 336 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 KRT75O95678 551 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 NUDT7P0C024 238 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 ADORA3P0DMS8 318 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 KRR1Q13601 381 aaKnown RBP22.86■■□□□ 1.25
TSKU-201ENST00000333090 ZSWIM9Q86XI8 627 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 STX19Q8N4C7 294 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 TMEM184CQ9NVA4 438 aa22.86■■□□□ 1.25
TSKU-201ENST00000333090 C14orf119Q9NWQ9 140 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms