RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SFT2D3Q587I9 215 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 IRAK1BP1Q5VVH5 260 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 DUS1LQ6P1R4 473 aaKnown RBP14.4□□□□□ -0.1
TPM3-205ENST00000328159 MSANTD1Q6ZTZ1 278 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 PDSS2Q86YH6 399 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 C1orf52Q8N6N3 182 aaKnown RBP14.4□□□□□ -0.1
TPM3-205ENST00000328159 TMEM102Q8N9M5 508 aaPredicted RBP14.4□□□□□ -0.1
TPM3-205ENST00000328159 GOLM1Q8NBJ4 401 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 CHTF18Q8WVB6 975 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 GFM2Q969S9 779 aaKnown RBP14.4□□□□□ -0.1
TPM3-205ENST00000328159 ITCHQ96J02 903 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 HHIPQ96QV1 700 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 FERD3LQ96RJ6 166 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 EFHD1Q9BUP0 239 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 KCNH6Q9H252 994 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 SPNS1Q9H2V7 528 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 RMND5AQ9H871 391 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 CD93Q9NPY3 652 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 SUFUQ9UMX1 484 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 USP22Q9UPT9 525 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 MAN2B2Q9Y2E5 1009 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 PLEKHM1Q9Y4G2 1056 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
TPM3-205ENST00000328159 A0A096LPI6 279 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 TCRBV21S2A2A0A5A6 115 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 PRR19A6NJB7 356 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SHISA7A6NL88 538 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 LATO43561 262 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 AKAP10O43572 662 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SH3BGRLO75368 114 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 HOXC4P09017 264 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 CDH1P12830 882 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 OR4D2P58180 307 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 C21orf58P58505 322 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 RAE1P78406 368 aaKnown RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 MSRB3Q8IXL7 192 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 DENND6BQ8NEG7 585 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 ADCY4Q8NFM4 1077 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 FAM3CQ92520 227 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 UBE2E3Q969T4 207 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 C12orf66Q96MD2 445 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 NRTNQ99748 197 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 MENTQ9BUN1 341 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 PAIP1Q9H074 479 aaKnown RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 PIF1Q9H611 641 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SERHLQ9NQF3 203 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 DMRT3Q9NQL9 472 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SLC25A37Q9NYZ2 338 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 MMP17Q9ULZ9 603 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 DTNAQ9Y4J8 743 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 PCDHB3Q9Y5E6 796 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 TRBV5-3A0A0A0MS03 114 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 ERN1O75460 977 aaKnown RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 MTHFD1P11586 935 aaKnown RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 NCK1P16333 377 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 IDSP22304 550 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 KIAA1024LP59773 190 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 MEF2AQ02078 507 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 CYP4F3Q08477 520 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 MTAPQ13126 283 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 CCINQ13939 588 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SF1Q15637 639 aaKnown RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 DPY19L1Q2PZI1 675 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 LRIT3Q3SXY7 679 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 AASDHQ4L235 1098 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 RUNDC3AQ59EK9 446 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 LRIF1Q5T3J3 769 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 GPR180Q86V85 440 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 C17orf64Q86WR6 236 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 TRIM69Q86WT6 500 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 PROSER1Q86XN7 944 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 CANT1Q8WVQ1 401 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 SMPDL3AQ92484 453 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 MSANTD3Q96H12 275 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 ACAT2Q9BWD1 397 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 PELI2Q9HAT8 420 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 FGF22Q9HCT0 170 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
TPM3-205ENST00000328159 ARMC1Q9NVT9 282 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 TAC3Q9UHF0 121 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 TSC22D4Q9Y3Q8 395 aa14.39□□□□□ -0.11
TPM3-205ENST00000328159 DHRS12A0PJE2 317 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 POM121BA6NF01 834 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 FPGTO14772 594 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 CAPNS1P04632 268 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 ANXA4P09525 319 aaPredicted RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 GABRG2P18507 467 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 HRH2P25021 359 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 TIA1P31483 386 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■□□□ 11.8
TPM3-205ENST00000328159 ACSL1P33121 698 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 SOX11P35716 441 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 KIR3DL1P43629 444 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 ASMTP46597 345 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 TPMTP51580 245 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 HNRNPFP52597 415 aaKnown RBP14.38□□□□□ -0.11
TPM3-205ENST00000328159 AQP4P55087 323 aa14.38□□□□□ -0.11
TPM3-205ENST00000328159 CLDN2P57739 230 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms