RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 SPPL2AQ8TCT8 520 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 SORCS1Q8WY21 1168 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 KCNH6Q9H252 994 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.38
CLGN-201ENST00000325617 SLC32A1Q9H598 525 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 C8orf4Q9NR00 106 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 RAD18Q9NS91 495 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 GIN1Q9NXP7 522 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 SH3BP4Q9P0V3 963 aa12.71□□□□□ -0.38
CLGN-201ENST00000325617 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.38
CLGN-201ENST00000325617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 SOBPA7XYQ1 873 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 HPRP00739 348 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ITIH1P19827 911 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 KDELR2P33947 212 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 MEF2AQ02078 507 aaPredicted RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 PTSQ03393 145 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 TUBA3CQ13748 450 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 MFSD4AQ8N468 514 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 NTMT1Q9BV86 223 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 BTBD2Q9BX70 525 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 THUMPD1Q9NXG2 353 aaKnown RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 USE1Q9NZ43 259 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 POU2F3Q9UKI9 436 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 LINC00854A0A1B0GVQ3 168 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 PCDH7O60245 1069 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 CKMP06732 381 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 SPNP16150 400 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 AOAHP28039 575 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 SLC19A1P41440 591 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 MC1RQ01726 317 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 CDKN3Q16667 212 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 COX20Q5RI15 118 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ATG9BQ674R7 924 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 NIPAL1Q6NVV3 410 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 RNF180Q86T96 592 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 HIPK1Q86Z02 1210 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ZZZ3Q8IYH5 903 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 UTP15Q8TED0 518 aaKnown RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 MAGED4Q96JG8 741 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ACOT13Q9NPJ3 140 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 NUMA1Q14980 2115 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 DYTNA2CJ06 578 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 FAM220BPB1ANY3 271 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 E7EQ34 232 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 KDM1AO60341 852 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 RETP07949 1114 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 CHRM5P08912 532 aaPredicted RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 RRM2P31350 389 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 SPAM1P38567 509 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 RPS3AP61247 264 aaKnown RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 GSTM4Q03013 218 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 OXA1LQ15070 435 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 NCCRP1Q6ZVX7 275 aaPredicted RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 PLD3Q8IV08 490 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 NAGSQ8N159 534 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 PCSK9Q8NBP7 692 aaKnown RBP12.7□□□□□ -0.38
CLGN-201ENST00000325617 COPS8Q99627 209 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 QPCTLQ9NXS2 382 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 GPR83Q9NYM4 423 aa12.7□□□□□ -0.38
CLGN-201ENST00000325617 EYSQ5T1H1 3165 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 A6NL46 340 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 INPPL1O15357 1258 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 RGS10O43665 173 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 SSX4O60224 188 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 ERN1O75460 977 aaKnown RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 FABP3P05413 133 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 AMD1P17707 334 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 GADD45AP24522 165 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 TMED10P49755 219 aaKnown RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 CLK1P49759 484 aaKnown RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 WNT3P56703 355 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 IRF8Q02556 426 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 GAB1Q13480 694 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 DOC2BQ14184 412 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 VMACQ2NL98 169 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 SHQ1Q6PI26 577 aaKnown RBP12.69□□□□□ -0.38
CLGN-201ENST00000325617 SYTL1Q8IYJ3 562 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 MMP21Q8N119 569 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 APH1BQ8WW43 257 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 TRIM39Q9HCM9 518 aa12.69□□□□□ -0.38
CLGN-201ENST00000325617 HMG20AQ9NP66 347 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms