RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PPP1R14CQ8TAE6 165 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 GSDMBQ8TAX9 411 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ACMSDQ8TDX5 336 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 STON2Q8WXE9 905 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 RNASE6Q93091 150 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 REG4Q9BYZ8 158 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SAYSD1Q9NPB0 183 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SAE1Q9UBE0 346 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CPNE7Q9UBL6 633 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NDOR1Q9UHB4 597 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 PHF3Q92576 2039 aaKnown RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 ILVBLA1L0T0 632 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 SDR42E2A6NKP2 422 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 TMPRSS2O15393 492 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 METTL18O95568 372 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 CPP00450 1065 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 MSL3P1P0C860 447 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 MMP11P24347 488 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 CD68P34810 354 aaPredicted RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 ZFP36L2P47974 494 aaKnown RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 GEMP55040 296 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 AP2B1P63010 937 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 RAD51Q06609 339 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 NSUN2Q08J23 767 aaKnown RBP eCLIP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 PDIA2Q13087 525 aaKnown RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 PRPSAP1Q14558 356 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 KRT71Q3SY84 523 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 MSS51Q4VC12 460 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 OTOAQ7RTW8 1153 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
CSTF3-201ENST00000323959 RAB3IL1Q8TBN0 382 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 PYROXD1Q8WU10 500 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 DCAKDQ8WVC6 231 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 KIFC1Q9BW19 673 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 IL22Q9GZX6 179 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 SLC25A51Q9H1U9 297 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 RAB6BQ9NRW1 208 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 ST14Q9Y5Y6 855 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 DOCK10Q96BY6 2186 aa6.34□□□□□ -1.39
CSTF3-201ENST00000323959 TCRBV7S3A2A0A539 114 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 CCDC189A1A4V9 331 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 TM9SF1O15321 606 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 RGS16O15492 202 aaPredicted RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 PRAMEF11O60813 436 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 HPP00738 406 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 UGT2B4P06133 528 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 CALRP27797 417 aaKnown RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 EPHB2P29323 1055 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 LIG3P49916 1009 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 CLCNKAP51800 687 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 SNRPD1P62314 119 aaKnown RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 ACVR1Q04771 509 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 IFFO1Q0D2I5 559 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 AGGF1Q8N302 714 aaeCLIP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 FBXO36Q8NEA4 188 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 PROKR1Q8TCW9 393 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 DENND1AQ8TEH3 1009 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 HMCESQ96FZ2 354 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 IMP4Q96G21 291 aaKnown RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 KCNK17Q96T54 332 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 TACO1Q9BSH4 297 aaKnown RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 YIPF4Q9BSR8 244 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 CAPS2Q9BXY5 557 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 ZNF701Q9NV72 531 aaPredicted RBP6.34□□□□□ -1.4
CSTF3-201ENST00000323959 NDFIP2Q9NV92 336 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 HEY1Q9Y5J3 304 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 CR1P17927 2039 aa6.34□□□□□ -1.4
CSTF3-201ENST00000323959 PTGS2P35354 604 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 MMP12P39900 470 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 ASCL1P50553 236 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 RENBPP51606 427 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 SORDQ00796 357 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 MSLNQ13421 630 aaPredicted RBP6.33□□□□□ -1.4
CSTF3-201ENST00000323959 ACKR1Q16570 336 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 KDELC1Q6UW63 502 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 NLRP9Q7RTR0 991 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 EXOC3L1Q86VI1 746 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 PACS2Q86VP3 889 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 KIF18BQ86Y91 864 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 EGFL6Q8IUX8 553 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 KBTBD2Q8IY47 623 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 ZBED8Q8IZ13 594 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 ATPAF2Q8N5M1 289 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 FAM98AQ8NCA5 519 aaKnown RBP6.33□□□□□ -1.4
CSTF3-201ENST00000323959 OLFM1Q99784 485 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 ZNF747Q9BV97 191 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 GLOD4Q9HC38 313 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 CNTRLQ7Z7A1 2325 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 IQANK1A0A1B0GTG1 560 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 LOC285095A0A1B0GVY8 99 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 OR5H15A6NDH6 313 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 RNF223E7ERA6 249 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 NPIPA5E9PKD4 350 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 FAM227AF5H4B4 570 aa6.33□□□□□ -1.4
CSTF3-201ENST00000323959 KDELR3O43731 214 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms