RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 EXOSC8Q96B26 276 aaKnown RBP14.32□□□□□ -0.12
TCOF1-201ENST00000323668 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 EFCAB11Q9BUY7 163 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 ING3Q9NXR8 418 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 MRPS7Q9Y2R9 242 aaKnown RBP14.32□□□□□ -0.12
TCOF1-201ENST00000323668 PCDHGA8Q9Y5G5 932 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 CCNYL3P0C7X3 344 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 PRKCZQ05513 592 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 HEPACAMQ14CZ8 416 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 GTDC1Q4AE62 458 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 THOC6Q86W42 341 aaKnown RBP14.32□□□□□ -0.12
TCOF1-201ENST00000323668 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
TCOF1-201ENST00000323668 RPL36Q9Y3U8 105 aaKnown RBP14.32□□□□□ -0.12
TCOF1-201ENST00000323668 SLC35G4P0C7Q5 338 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 ATXN1LP0C7T5 689 aaKnown RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 GKP32189 559 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TAS2R41P59536 307 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SGCGQ13326 291 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 IRF5Q13568 498 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 CARD16Q5EG05 197 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TNFAIP8L2Q6P589 184 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SPRED1Q7Z699 444 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 OR52L1Q8NGH7 329 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 CLEC4MQ9H2X3 399 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TVP23BQ9NYZ1 205 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 PCDHA9Q9Y5H5 950 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 ACTL7AQ9Y615 435 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 HSPE1-MOB4S4R3N1 261 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 EVPLQ92817 2033 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TGFB1P01137 390 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 BMP7P18075 431 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SDE2Q6IQ49 451 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 HS3ST5Q8IZT8 346 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SAP18O00422 153 aaKnown RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 PI15O43692 258 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SERPINI2O75830 405 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 PPM1AP35813 382 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 OPRL1P41146 370 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 RORCP51449 518 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 APLP1P51693 650 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 NPRL3Q12980 569 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 AGTRAPQ6RW13 159 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 MBOAT1Q6ZNC8 495 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 TMA7Q9Y2S6 64 aaKnown RBP14.31□□□□□ -0.12
TCOF1-201ENST00000323668 NUP205Q92621 2012 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 CRHR2Q13324 411 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 RAPSNQ13702 412 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 MFSD6LQ8IWD5 586 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 C10orf53Q8N6V4 93 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 COQ7Q99807 217 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 HEBP1Q9NRV9 189 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 PCDHB14Q9Y5E9 798 aa14.31□□□□□ -0.12
TCOF1-201ENST00000323668 MITFO75030 526 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SDC2P34741 201 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SRP54P61011 504 aaKnown RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 HSPB3Q12988 150 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 MADCAM1Q13477 382 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SLBPQ14493 270 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ANKRD26P1Q6NSI1 321 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 DCDC5Q6ZRR9 648 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TSPYL5Q86VY4 417 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ITPKCQ96DU7 683 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 NAA50Q9GZZ1 169 aaKnown RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TRBC2A0A5B9 178 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 FABP12A6NFH5 140 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SOCS5O75159 536 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 DCKP27707 260 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 HNF1BP35680 557 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TARDBPQ13148 414 aaKnown RBP eCLIP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 CDK5R2Q13319 367 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 HMBOX1Q6NT76 420 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF783Q6ZMS7 281 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 OR5AK3PQ8NH89 298 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 MAPKAP1Q9BPZ7 522 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 RPS6KB2Q9UBS0 482 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SNX7Q9UNH6 387 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 MYADML2A6NDP7 307 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 DRGXA6NNA5 263 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 SRPRAP08240 638 aaKnown RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 CRHBPP24387 322 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 TSTQ16762 297 aaKnown RBP14.3□□□□□ -0.12
TCOF1-201ENST00000323668 DDI2Q5TDH0 399 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 RNF111Q6ZNA4 994 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF461Q8TAF7 563 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 ZNF671Q8TAW3 534 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 NETO1Q8TDF5 533 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 RAD51AP1Q96B01 352 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 OMA1Q96E52 524 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 PKP4Q99569 1192 aa14.3□□□□□ -0.12
TCOF1-201ENST00000323668 WRAP53Q9BUR4 548 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms