RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ZDHHC4Q9NPG8 344 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 NECTIN3Q9NQS3 549 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 PCDHGA10Q9Y5H3 936 aa15.1■□□□□ 0.01
SHROOM1-201ENST00000319854 EEDO75530 441 aaKnown RBP15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 STK16O75716 305 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 PHC1P78364 1004 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 EMX2Q04743 252 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 CDK5R2Q13319 367 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 LRRC26Q2I0M4 334 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 SPESP1Q6UW49 350 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 Q6ZVL8 140 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 USP45Q70EL2 814 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 P2RY8Q86VZ1 359 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 CELF2-AS1Q8N7Q2 184 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 FIBINQ8TAL6 211 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 RORBQ92753 470 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 ISG20Q96AZ6 181 aaKnown RBP15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 IKZF5Q9H5V7 419 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 RAP2AP10114 183 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 PCBP2Q15366 365 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 CDKN3Q16667 212 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 ZFAND4Q86XD8 727 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 PROSER1Q86XN7 944 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 TMC8Q8IU68 726 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 TRIM43Q96BQ3 446 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 C1QTNF3Q9BXJ4 246 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 DPY30Q9C005 99 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 BOLA1Q9Y3E2 137 aa15.09■□□□□ 0.01
SHROOM1-201ENST00000319854 SSX4O60224 188 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 HS6ST1O60243 411 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 WDR47O94967 919 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 CHRNB1P11230 501 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 PSMB9P28065 219 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 VAC14Q08AM6 782 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 ABRQ12979 859 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 RAPSNQ13702 412 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 FXNQ16595 210 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 LY6G5CQ5SRR4 150 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 GCNT7Q6ZNI0 430 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 LINC00299Q6ZSB3 139 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 HTR3DQ70Z44 454 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 LILRA3Q8N6C8 439 aaPredicted RBP15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 NCLNQ969V3 563 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 CEP295NLQ96MC4 621 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 EBPLQ9BY08 206 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 BRINP2Q9C0B6 783 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 SLC22A14Q9Y267 594 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 OARD1Q9Y530 152 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 U3KQV3 271 aa15.08■□□□□ 0.01
SHROOM1-201ENST00000319854 GSTA4O15217 222 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 MITFO75030 526 aaPredicted RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 CST1P01037 141 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 ETV3P41162 512 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 SERPINB10P48595 397 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 NPTX1Q15818 432 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 COQ5Q5HYK3 327 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 SUSD1Q6UWL2 747 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 TPRG1Q6ZUI0 275 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 SELENOMQ8WWX9 145 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 LGALS12Q96DT0 336 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 SCRN2Q96FV2 425 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 RETREG1Q9H6L5 497 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 N6AMT1Q9Y5N5 214 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 GBF1Q92538 1859 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 PABPN1LA6NDY0 278 aaKnown RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 TMEM202A6NGA9 273 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 PER2O15055 1255 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 PARNO95453 639 aaKnown RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 OLFM2O95897 454 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 TYRP14679 529 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 RECQLP46063 649 aaPredicted RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 CHRNB3Q05901 458 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 MAPKAPK3Q16644 382 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 ZNF691Q5VV52 312 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 RSBN1Q5VWQ0 802 aaPredicted RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 HID1Q8IV36 788 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 PJA1Q8NG27 643 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 EGLN2Q96KS0 407 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 LRRC3Q9BY71 257 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 ASPSCR1Q9BZE9 553 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 MOV10Q9HCE1 1003 aaKnown RBP15.08■□□□□ 0
SHROOM1-201ENST00000319854 SLC6A13Q9NSD5 602 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 UGT2A1Q9Y4X1 527 aa15.08■□□□□ 0
SHROOM1-201ENST00000319854 DYTNA2CJ06 578 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 GLUD1P00367 558 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 C1QCP02747 245 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 FTH1P02794 183 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 PFKLP17858 780 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 NSG1P42857 185 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 CLCA4Q14CN2 919 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 SMN1Q16637 294 aaKnown RBP15.07■□□□□ 0
SHROOM1-201ENST00000319854 ZXDCQ2QGD7 858 aaPredicted RBP15.07■□□□□ 0
SHROOM1-201ENST00000319854 TTLL9Q3SXZ7 439 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 FAM98BQ52LJ0 330 aaKnown RBP15.07■□□□□ 0
SHROOM1-201ENST00000319854 DLEU7Q6UYE1 221 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 CACUL1Q86Y37 369 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 LACC1Q8IV20 430 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 HTATIP2Q9BUP3 242 aa15.07■□□□□ 0
SHROOM1-201ENST00000319854 LRTM1Q9HBL6 345 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms