RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 FGD3Q5JSP0 725 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 KDM4DQ6B0I6 523 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 CAPN13Q6MZZ7 669 aaPredicted RBP13.34□□□□□ -0.27
ATG4C-201ENST00000317868 CBLL1Q75N03 491 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 RTL10Q7L3V2 364 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
ATG4C-201ENST00000317868 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 NLRP8Q86W28 1048 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 ZDHHC21Q8IVQ6 265 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 ARL10Q8N8L6 244 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 FBXO15Q8NCQ5 510 aaPredicted RBP13.34□□□□□ -0.27
ATG4C-201ENST00000317868 B4GALNT2Q8NHY0 566 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 SKA2Q8WVK7 121 aaPredicted RBP13.34□□□□□ -0.27
ATG4C-201ENST00000317868 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 MUL1Q969V5 352 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 TRIT1Q9H3H1 467 aaKnown RBP13.34□□□□□ -0.27
ATG4C-201ENST00000317868 TM9SF3Q9HD45 589 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 SIRT5Q9NXA8 310 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 GULP1Q9UBP9 304 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 PLXND1Q9Y4D7 1925 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 AP1M2Q9Y6Q5 423 aa13.34□□□□□ -0.27
ATG4C-201ENST00000317868 A0A1W2PPW3 197 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 TTC34A8MYJ7 566 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 SLC1A7O00341 560 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 SCAMP2O15127 329 aaKnown RBP13.33□□□□□ -0.27
ATG4C-201ENST00000317868 TSPAN6O43657 245 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 ETHE1O95571 254 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.27
ATG4C-201ENST00000317868 ENGP17813 658 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 CRYBA2P53672 197 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 NFATC3Q12968 1075 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 PRSS36Q5K4E3 855 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 ZNF648Q5T619 568 aaPredicted RBP13.33□□□□□ -0.27
ATG4C-201ENST00000317868 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 SYT12Q8IV01 421 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 CROCCP3Q8IVE0 287 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 RAVER1Q8IY67 606 aaKnown RBP13.33□□□□□ -0.27
ATG4C-201ENST00000317868 ATL1Q8WXF7 558 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 LINC00597Q9H2U6 94 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 BTNL2Q9UIR0 455 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 BTBD3Q9Y2F9 522 aa13.33□□□□□ -0.27
ATG4C-201ENST00000317868 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 GNGT2O14610 69 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 HS6ST1O60243 411 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 DNAJB5O75953 348 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 CCDC159P0C7I6 412 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PRKACGP22612 351 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ACVR2AP27037 513 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 MAPK9P45984 424 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 VEZF1Q14119 521 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 KEAP1Q14145 624 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 CCSMST1Q4G0I0 132 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ZNF805Q5CZA5 627 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 LY6G5CQ5SRR4 150 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 CEP68Q76N32 757 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 CHTF18Q8WVB6 975 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 STARD8Q92502 1023 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 TRIM43Q96BQ3 446 aaPredicted RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 WDR34Q96EX3 536 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 NRBF2Q96F24 287 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 MAGED4Q96JG8 741 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 CSF3RQ99062 836 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 BARD1Q99728 777 aaKnown RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PLGRKTQ9HBL7 147 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 TBC1D14Q9P2M4 693 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 HSPE1-MOB4S4R3N1 261 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PABPN1LA6NDY0 278 aaKnown RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 OR2AG2A6NM03 316 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 MAGEB17A8MXT2 336 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 TMEM229AB2RXF0 380 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 SPINT1O43278 529 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 LILRB5O75023 590 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 SYN1P17600 705 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ITIH1P19827 911 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 AGXTP21549 392 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ENTPD1P49961 510 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 XKR6Q5GH73 641 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 OR2T5Q6IEZ7 315 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 ANKRD26P1Q6NSI1 321 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 EIF3MQ7L2H7 374 aaKnown RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 OR2T29Q8NH02 315 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 RAB2BQ8WUD1 216 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 GLYATL1Q969I3 302 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 COQ8BQ96D53 544 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PANX1Q96RD7 426 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 DCUN1D5Q9BTE7 237 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 PCDHB11Q9Y5F2 797 aa13.33□□□□□ -0.28
ATG4C-201ENST00000317868 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 PSMD11O00231 422 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms