RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 UPK1AO00322 258 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RNASET2O00584 256 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RPN2P04844 631 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 CCT8P50990 548 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RPL38P63173 70 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 HMGCS1Q01581 520 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ELOAQ14241 798 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PTGR1Q14914 329 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 CEBPEQ15744 281 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SFT2D3Q587I9 215 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 FAM71E1Q6IPT2 247 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PPP4R4Q6NUP7 873 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 GCNT7Q6ZNI0 430 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 LINC01555Q8NAE3 123 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ATP6V1E2Q96A05 226 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 VPS33AQ96AX1 596 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RAD51AP1Q96B01 352 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 RAB11FIP5Q9BXF6 653 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 VCX3BQ9H321 246 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 WDR26Q9H7D7 661 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 MVB12BQ9H7P6 319 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ACTR8Q9H981 624 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 LHX9Q9NQ69 397 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SLC6A13Q9NSD5 602 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PACSIN3Q9UKS6 424 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 NUP210LQ5VU65 1888 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 HNRNPRO43390 633 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TNFSF14O43557 240 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SCELO95171 688 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 CSPG5O95196 566 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 KCNH1O95259 989 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 IFI6P09912 130 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 IDSP22304 550 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TACR1P25103 407 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ASMTP46597 345 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 MVDP53602 400 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TRA2BP62995 288 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 LIPEQ05469 1076 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 INPP5AQ14642 412 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SMAD2Q15796 467 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ATP6AP1Q15904 470 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 EOGTQ5NDL2 527 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 MED27Q6P2C8 311 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SCIMPQ6UWF3 145 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 DHFR2Q86XF0 187 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SNX31Q8N9S9 440 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 HUS1BQ8NHY5 278 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 CREB3L4Q8TEY5 395 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SELENOMQ8WWX9 145 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 BMFQ96LC9 184 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 C1QTNF7Q9BXJ2 289 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TRIM15Q9C019 465 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 AICDAQ9GZX7 198 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PCDHAC1Q9H158 963 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SPNS1Q9H2V7 528 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 WDR37Q9Y2I8 494 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ANGPTL3Q9Y5C1 460 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 KRT87PA6NCN2 255 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 YY2O15391 372 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PEBP1P30086 187 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TIA1P31483 386 aaKnown RBP eCLIP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 POLE2P56282 527 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TXNL4AP83876 142 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 HYAL2Q12891 473 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 NFATC4Q14934 902 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 POM121L1PQ3SYA9 428 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 MMEL1Q495T6 779 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 CCDC80Q76M96 950 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 TRIM74Q86UV6 250 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 UBE2E3Q969T4 207 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 REXO5Q96IC2 774 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SLC39A3Q9BRY0 314 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 IKZF5Q9H5V7 419 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 KCNK12Q9HB15 430 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 PHPT1Q9NRX4 125 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 ANKMY1Q9P2S6 941 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 GMPR2Q9P2T1 348 aaKnown RBP6.91□□□□□ -1.3
NPHP1-201ENST00000316534 SUFUQ9UMX1 484 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 KCNE2Q9Y6J6 123 aa6.91□□□□□ -1.3
NPHP1-201ENST00000316534 KANSL1LA0AUZ9 987 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 SLC2A4P14672 509 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 UQCRBP14927 111 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 TSFMP43897 325 aaKnown RBP6.9□□□□□ -1.3
NPHP1-201ENST00000316534 PPP2CBP62714 309 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 PPP2CAP67775 309 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 NAE1Q13564 534 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 NFYCQ13952 458 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 IQCCQ4KMZ1 466 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 SPANXN4Q5MJ08 99 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 AP1ARQ63HQ0 302 aa6.9□□□□□ -1.3
NPHP1-201ENST00000316534 CPZQ66K79 652 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms