RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PCDHAC2Q9Y5I4 1007 aa3.85□□□□□ -1.79
SMCO3-201ENST00000316048 COL2A1P02458 1487 aaPredicted RBP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 EVPLQ92817 2033 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 A0A087WWV3 80 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 C5orf60A6NFR6 353 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 PSMA7O14818 248 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 IGHV4-30-4P0DP06 118 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 ATP6V1B1P15313 513 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 GCFC2P16383 781 aaKnown RBP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 RPS12P25398 132 aaKnown RBP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 TNFRSF8P28908 595 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 CTSCP53634 463 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 MAPK12P53778 367 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 PDIA5Q14554 519 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 IL17AQ16552 155 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 TYSND1Q2T9J0 566 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 FAM91A1Q658Y4 838 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 IYDQ6PHW0 289 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 ABI3BPQ7Z7G0 1075 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 CREBRFQ8IUR6 639 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 SPATA20Q8TB22 786 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 THAP6Q8TBB0 222 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 AFAP1L1Q8TED9 768 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 ABTB1Q969K4 478 aaPredicted RBP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 PIGTQ969N2 578 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 OXNAD1Q96HP4 312 aaPredicted RBP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 FUT8Q9BYC5 575 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 LRMDAQ9H2I8 198 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 MAGEF1Q9HAY2 307 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 MIOSQ9NXC5 875 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 SEPT10Q9P0V9 454 aa3.84□□□□□ -1.79
SMCO3-201ENST00000316048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMCO3-201ENST00000316048 MYH8P13535 1937 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 A0A1W2PPQ1 181 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CLRN2A0PK11 232 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 OR5K3A6NET4 321 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 H3BNX3 289 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 KRT19P08727 400 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SRCP12931 536 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SCP2P22307 547 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ARRB2P32121 409 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 MTHFRP42898 656 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 PSMC4P43686 418 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SLC20A2Q08357 652 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 AP1B1Q10567 949 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 MYBPHQ13203 477 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CDC37Q16543 378 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CALCRLQ16602 461 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TPD52L1Q16890 204 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 GRTP1Q5TC63 336 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 PXDC1Q5TGL8 231 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SPATA21Q7Z572 469 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 HOOK3Q86VS8 718 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A12PQ8NF67 263 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CHURC1Q8WUH1 139 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 HEXDCQ8WVB3 486 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TMED6Q8WW62 240 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 KRT35Q92764 455 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SYN2Q92777 582 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TANKQ92844 425 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SLAMF9Q96A28 289 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 STAMBPL1Q96FJ0 436 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SPATA33Q96N06 139 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SFXN2Q96NB2 322 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 LRRC3BQ96PB8 259 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CTAGE1Q96RT6 745 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 MMTAG2Q9BU76 263 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 XPO4Q9C0E2 1151 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 DNAI2Q9GZS0 605 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 WNT5BQ9H1J7 359 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 MYOZ2Q9NPC6 264 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 DPP3Q9NY33 737 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 IFNKQ9P0W0 207 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 LRWD1Q9UFC0 647 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ARMCX3Q9UH62 379 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ABT1Q9ULW3 272 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 A0A0U1RQJ8 604 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SOCS2O14508 198 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 PPEF2O14830 753 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SIX3O95343 332 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 BMP10O95393 424 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 NDUFB10O96000 172 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TOMM40O96008 361 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SMIM18P0DKX4 95 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TCF7P36402 384 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 HNF4AP41235 474 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 PPP1R2P41236 205 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ADARP55265 1226 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF155Q12901 538 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 NFATC4Q14934 902 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 KARSQ15046 597 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 QRICH1Q2TAL8 776 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF658Q5TYW1 1059 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CCNI2Q6ZMN8 369 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 GBP6Q6ZN66 633 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 MRPL10Q7Z7H8 261 aaKnown RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SATL1Q86VE3 508 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms