RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 DIRAS2Q96HU8 199 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 FRG2BQ96QU4 278 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 MBOAT4Q96T53 435 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 CLN6Q9NWW5 311 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 KCTD5Q9NXV2 234 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 PCDHGA10Q9Y5H3 936 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 PRR23AA6NEV1 266 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 NPPAP01160 153 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 PPP5CP53041 499 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 GRIK2Q13002 908 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 MRPL28Q13084 256 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 NFATC2Q13469 925 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 HIST2H2ACQ16777 129 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 RNASE12Q5GAN4 147 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 ZNF691Q5VV52 312 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 KLHL17Q6TDP4 642 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 ZNF467Q7Z7K2 595 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 OR9Q2Q8NGE9 314 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 SCAMP4Q969E2 229 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 ACPTQ9BZG2 426 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 SLC32A1Q9H598 525 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 MS4A12Q9NXJ0 267 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 SLC25A37Q9NYZ2 338 aa13.9□□□□□ -0.18
CSNK1D-202ENST00000314028 CCRL2O00421 344 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CTDSP2O14595 271 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 ZNF865P0CJ78 1059 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 DAPP51397 102 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 SGSHP51688 502 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 IL18R1Q13478 541 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 MANEALQ5VSG8 457 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 THOC7Q6I9Y2 204 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 RGMBQ6NW40 437 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TMPRSS11AQ6ZMR5 421 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 DTX3Q8N9I9 347 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 STARD8Q92502 1023 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC38A4Q969I6 547 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 MCMBPQ9BTE3 642 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CLEC4AQ9UMR7 237 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM25AB3EWG3 89 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM25CB3EWG5 89 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM25GB3EWG6 89 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CACNG3O60359 315 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 LAMP1P11279 417 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TRIQKQ629K1 86 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TMEM169Q96HH4 297 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 FUBP3Q96I24 572 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 ACOT13Q9NPJ3 140 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 VNN3Q9NY84 501 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CCDC182A6NF36 153 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 SULT1C4O75897 302 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 HPRP00739 348 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 PRPS2P11908 318 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 ITIH1P19827 911 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 RFX3P48380 749 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 STK19P49842 368 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TIMM50Q3ZCQ8 353 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 CPZQ66K79 652 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 USP43Q70EL4 1123 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 SNX20Q7Z614 316 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TRIM69Q86WT6 500 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 OR6Q1Q8NGQ2 317 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 DUS3LQ96G46 650 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 RDH12Q96NR8 316 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
CSNK1D-202ENST00000314028 C2orf78A6NCI8 922 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 H3BM21 787 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 TNFRSF10BO14763 440 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 COCHO43405 550 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SMAD6O43541 496 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 CPNE6O95741 557 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 PEX11BO96011 259 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 NNMTP40261 264 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 PREPP48147 710 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 NCF4Q15080 339 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 XKR4Q5GH76 650 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 ADGRF1Q5T601 910 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 STEAP3Q658P3 488 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 CELF2-AS1Q8N7Q2 184 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 HDHD2Q9H0R4 259 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SAGE2PA6NJ88 616 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms