RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MOSPD1Q9UJG1 213 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 SUFUQ9UMX1 484 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 KCNK6Q9Y257 313 aa20.51■□□□□ 0.87
ATG4D-201ENST00000309469 LATO43561 262 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 KCNJ13O60928 360 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 SH3BGRLO75368 114 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 GLULP15104 373 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 NDUFV2P19404 249 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 KLC1Q07866 573 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 SF1Q15637 639 aaKnown RBP20.5■□□□□ 0.87
ATG4D-201ENST00000309469 FBXO43Q4G163 708 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 AASDHQ4L235 1098 aaPredicted RBP20.5■□□□□ 0.87
ATG4D-201ENST00000309469 MSRB3Q8IXL7 192 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 C1orf52Q8N6N3 182 aaKnown RBP20.5■□□□□ 0.87
ATG4D-201ENST00000309469 GFM2Q969S9 779 aaKnown RBP20.5■□□□□ 0.87
ATG4D-201ENST00000309469 MENTQ9BUN1 341 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 SERHLQ9NQF3 203 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 CCM2LQ9NUG4 571 aaPredicted RBP20.5■□□□□ 0.87
ATG4D-201ENST00000309469 ARMC1Q9NVT9 282 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 SLC25A37Q9NYZ2 338 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 SPATA7Q9P0W8 599 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 USP22Q9UPT9 525 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 MAN2B2Q9Y2E5 1009 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 PLEKHM1Q9Y4G2 1056 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 GPSM3Q9Y4H4 160 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 DTNAQ9Y4J8 743 aa20.5■□□□□ 0.87
ATG4D-201ENST00000309469 ERN1O75460 977 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 CAPNS1P04632 268 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 MTHFD1P11586 935 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 RAE1P78406 368 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 MEF2AQ02078 507 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 BLMHQ13867 455 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 SPIN4Q56A73 249 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 RUNDC3AQ59EK9 446 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 DUS1LQ6P1R4 473 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 ADCY4Q8NFM4 1077 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 ITCHQ96J02 903 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 C12orf66Q96MD2 445 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 FERD3LQ96RJ6 166 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 NRTNQ99748 197 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 SH3GL1Q99961 368 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 PAIP1Q9H074 479 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 SPNS1Q9H2V7 528 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 CD93Q9NPY3 652 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 PCDHB3Q9Y5E6 796 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 ATG2BQ96BY7 2078 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 SHISA7A6NL88 538 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 MBTPS2O43462 519 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 AKAP10O43572 662 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 NARSO43776 548 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 ASGR2P07307 311 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 CDH1P12830 882 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 NCK1P16333 377 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 OR4D2P58180 307 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 MTAPQ13126 283 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 LRIF1Q5T3J3 769 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 MSANTD1Q6ZTZ1 278 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 GPR180Q86V85 440 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 PROSER1Q86XN7 944 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 LRTOMTQ8WZ04 291 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 UBE2E3Q969T4 207 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 SCARF2Q96GP6 870 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 THUMPD3Q9BV44 507 aaKnown RBP20.49■□□□□ 0.87
ATG4D-201ENST00000309469 DMRT3Q9NQL9 472 aa20.49■□□□□ 0.87
ATG4D-201ENST00000309469 A0A096LPI6 279 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 TRBV5-3A0A0A0MS03 114 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 DHRS12A0PJE2 317 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 PRR19A6NJB7 356 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 HOXC4P09017 264 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-201ENST00000309469 ACSL1P33121 698 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 SOX11P35716 441 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 AQP4P55087 323 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 C21orf58P58505 322 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 SRSF11Q05519 484 aaKnown RBP20.48■□□□□ 0.87
ATG4D-201ENST00000309469 CYP4F3Q08477 520 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 SMAD4Q13485 552 aaKnown RBP20.48■□□□□ 0.87
ATG4D-201ENST00000309469 CCINQ13939 588 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 DPY19L1Q2PZI1 675 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 DNAJC14Q6Y2X3 702 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-201ENST00000309469 CATSPER1Q8NEC5 780 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 SMPDL3AQ92484 453 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 FAM3CQ92520 227 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 ZNF583Q96ND8 569 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 ACAT2Q9BWD1 397 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 TAC3Q9UHF0 121 aa20.48■□□□□ 0.87
ATG4D-201ENST00000309469 TMEM265A0A087WTH1 108 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 POM121BA6NF01 834 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 ANXA4P09525 319 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-201ENST00000309469 IDSP22304 550 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 KIR3DL1P43629 444 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TPMTP51580 245 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 CLDN2P57739 230 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 MLF2Q15773 248 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-201ENST00000309469 UGT8Q16880 541 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 OR4F3Q6IEY1 312 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 C17orf64Q86WR6 236 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 FAM129CQ86XR2 697 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 ZNF740Q8NDX6 193 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 GPR156Q8NFN8 814 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 SH3KBP1Q96B97 665 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms