RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CATSPEREQ5SY80 951 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 CWF19L1Q69YN2 538 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 ZFP1Q6P2D0 407 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 SLC2A7Q6PXP3 512 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 NXPE4Q6UWF7 544 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 DLEU7Q6UYE1 221 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 RNF111Q6ZNA4 994 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 ARPINQ7Z6K5 226 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 DHDDSQ86SQ9 333 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 LAS2Q8IYD9 372 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 RNF175Q8N4F7 328 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 HIPK4Q8NE63 616 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 SLC13A3Q8WWT9 602 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 ANKRD27Q96NW4 1050 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 IL17FQ96PD4 163 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 MYOCQ99972 504 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 HAUS8Q9BT25 410 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 FGF22Q9HCT0 170 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 GEMIN8Q9NWZ8 242 aaKnown RBP11.46□□□□□ -0.57
TRIM40-205ENST00000307859 PLAGL1Q9UM63 463 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 TSC22D4Q9Y3Q8 395 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 NEUROG3Q9Y4Z2 214 aa11.46□□□□□ -0.57
TRIM40-205ENST00000307859 PRSS38A1L453 326 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 PIPSLA2A3N6 862 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 ZNF839A8K0R7 811 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 FPGTO14772 594 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 LATO43561 262 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 C8BP07358 591 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 TCN1P20061 433 aaPredicted RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 CD72P21854 359 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 EEFSECP57772 596 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 YBX1P67809 324 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 BNIP2Q12982 314 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 LAPTM5Q13571 262 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 FAM174BQ3ZCQ3 159 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 SPANXN4Q5MJ08 99 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 ADNP2Q6IQ32 1131 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 NOXRED1Q6NXP6 359 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 DUS1LQ6P1R4 473 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 RIMKLAQ8IXN7 391 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 LMNTD1Q8N9Z9 388 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 HUS1BQ8NHY5 278 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 TESCQ96BS2 214 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 APOLD1Q96LR9 279 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 C12orf66Q96MD2 445 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 OR2M4Q96R27 311 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 INSM2Q96T92 566 aaPredicted RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 MTERF1Q99551 399 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 OSGEPL1Q9H4B0 414 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 EBF1Q9UH73 591 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 NDRG2Q9UN36 371 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 KCNK6Q9Y257 313 aa11.46□□□□□ -0.58
TRIM40-205ENST00000307859 RUVBL1Q9Y265 456 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 TDRKHQ9Y2W6 561 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 CFAP20Q9Y6A4 193 aaKnown RBP11.46□□□□□ -0.58
TRIM40-205ENST00000307859 MAGEB17A8MXT2 336 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 CHURC1-FNTBB4DL54 471 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 FOXE1O00358 373 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PRMT3O60678 531 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 ETHE1O95571 254 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PGRP06401 933 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 CHRNB1P11230 501 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 IDSP22304 550 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 TACR1P25103 407 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 CLDN2P57739 230 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 C21orf58P58505 322 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PWP1Q13610 501 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 DDX39BQ13838 428 aaKnown RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 SLBPQ14493 270 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 ZC3H14Q6PJT7 736 aaKnown RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 Q6ZS52 159 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 LPCAT2Q7L5N7 544 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 HID1Q8IV36 788 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 CLHC1Q8NHS4 586 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 NUDT8Q8WV74 236 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 HMGB4Q8WW32 186 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 SMPDL3AQ92484 453 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 GTF2H4Q92759 462 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 BMFQ96LC9 184 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 TMEM74Q96NL1 305 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 TACO1Q9BSH4 297 aaKnown RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PCBD2Q9H0N5 130 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PCDHAC1Q9H158 963 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 POLMQ9NP87 494 aaPredicted RBP11.45□□□□□ -0.58
TRIM40-205ENST00000307859 SLAMF8Q9P0V8 285 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PPT2Q9UMR5 302 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 DUSP12Q9UNI6 340 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 PLEKHM1Q9Y4G2 1056 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
TRIM40-205ENST00000307859 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 A0A1W2PPV9 198 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 TCRBV3S1A0A5B6 114 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 KCNH1O95259 989 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms