RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 COCHO43405 550 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SYNGR4O95473 234 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 HRGP04196 525 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 DRD4P21917 467 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PSMA1P25786 263 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 GJA5P36382 358 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 IST1P53990 364 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TXNL4AP83876 142 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PITRM1Q5JRX3 1037 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ZMIZ2Q8NF64 920 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PPP1R13LQ8WUF5 828 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 WDR92Q96MX6 357 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 MKKSQ9NPJ1 570 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ZNF490Q9ULM2 529 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TRAPPC6AO75865 159 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PROCP04070 461 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CSTBP04080 98 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 IFNW1P05000 195 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PGRP06401 933 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ATP1B2P14415 290 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CXCL12P48061 93 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PGDP52209 483 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 MC1RQ01726 317 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 MEF2AQ02078 507 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OCLNQ16625 522 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC8B1Q6J4K2 584 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 NPNTQ6UXI9 565 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CPXM2Q8N436 756 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TRAM1L1Q8N609 369 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 HORMAD2Q8N7B1 307 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OR2T3Q8NH03 318 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CEP76Q8TAP6 659 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 AENQ8WTP8 325 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 DGAT2Q96PD7 388 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 FEM1AQ9BSK4 669 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PRORSD1PA6NEY8 169 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ALOX5P09917 674 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 FAM153BP0C7A2 387 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 HOXA11P31270 313 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 IL18Q14116 193 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 UBE2J2Q8N2K1 259 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 NR4A3Q92570 626 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OR2M4Q96R27 311 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CCDC59Q9P031 241 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ARHGEF17Q96PE2 2063 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PARP14Q460N5 1801 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ARID2Q68CP9 1835 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 RBMS1P29558 406 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 DSC2Q02487 901 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PLP2Q04941 152 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PUM1Q14671 1186 aaKnown RBP eCLIP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ADNP2Q6IQ32 1131 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SYCE2Q6PIF2 218 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 MBOAT1Q6ZNC8 495 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SATL1Q86VE3 508 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SDR16C5Q8N3Y7 309 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 WDR90Q96KV7 1748 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 EBF3Q9H4W6 596 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TCF7L1Q9HCS4 588 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PREBQ9HCU5 417 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ARL8BQ9NVJ2 186 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 C14orf105Q9NVL8 296 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 WRAP73Q9P2S5 460 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 MRPL42Q9Y6G3 142 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PIAS3Q9Y6X2 628 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SLC16A5O15375 505 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TULP3O75386 442 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ALPPP05187 535 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 HOXD8P13378 290 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 TCEA1P23193 301 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CXCR1P25024 350 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PITPNAQ00169 270 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 GRM2Q14416 872 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ZC3HC1Q86WB0 502 aaKnown RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 OR6K2Q8NGY2 324 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 CLHC1Q8NHS4 586 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SEMA6AQ9H2E6 1030 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 PDLIM7Q9NR12 457 aa8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 POLR3HQ9Y535 204 aaPredicted RBP8.12□□□□□ -1.11
PCDHB1-201ENST00000306549 SCN2AQ99250 2005 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 MT-ND5P03915 603 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 IL7RP16871 459 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 RPA4Q13156 261 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 POC5Q8NA72 575 aa8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 VANGL1Q8TAA9 524 aaPredicted RBP8.11□□□□□ -1.11
PCDHB1-201ENST00000306549 FAM3CQ92520 227 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms