RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 EPYCQ99645 322 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 GPR21Q99679 349 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 KCNJ15Q99712 375 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SRRQ9GZT4 340 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 KCNH6Q9H252 994 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 C11orf49Q9H6J7 331 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 HEXA-AS1Q9H8Q6 139 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MARCH2Q9P0N8 246 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CPA4Q9UI42 421 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 DNMT3LQ9UJW3 386 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 KLK4Q9Y5K2 254 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 MDC1Q14676 2089 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 CACNB4O00305 520 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 BCKDKO14874 412 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 UGT2B17O75795 530 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PARNO95453 639 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 CST1P01037 141 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ALBP02768 609 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 IL6P05231 212 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 POU2F2P09086 479 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TRAPPC2P0DI81 140 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TRAPPC2BP0DI82 140 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MPC1LP0DKB6 136 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MZF1P28698 734 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 GRIK1P39086 918 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CASP2P42575 452 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MAPK8P45983 427 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TRPC1P48995 793 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 UGT2B15P54855 530 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SLC12A2P55011 1212 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 DCDC1P59894 354 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ABRQ12979 859 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SP140Q13342 867 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 KCNA10Q16322 511 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 UGT8Q16880 541 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 LRRC26Q2I0M4 334 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 FUT11Q495W5 492 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GPR33Q49SQ1 333 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CCDC58Q4VC31 144 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PAGE2BQ5JRK9 111 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TPGS2Q68CL5 300 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 C16orf87Q6PH81 154 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ANKS3Q6ZW76 656 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CCDC80Q76M96 950 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 P2RY8Q86VZ1 359 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SVOPQ8N4V2 548 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 FBXO15Q8NCQ5 510 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 ITFG1Q8TB96 612 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PPWD1Q96BP3 646 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 TUBGCP3Q96CW5 907 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 VWCEQ96DN2 955 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SEMA3CQ99985 751 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CPEB1Q9BZB8 566 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 EPS8L2Q9H6S3 715 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PLEKHB1Q9UF11 243 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 ADGRE2Q9UHX3 823 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 WDFY3Q8IZQ1 3526 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 A0A0D9SEW6 157 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 RNF103-CHMP3A0A140T963 221 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 A0A1B0GVM2 712 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SLC28A1O00337 649 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 FFAR1O14842 300 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 DEAF1O75398 565 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 PGRP06401 933 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CAPN1P07384 714 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GAAP10253 952 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TFPIP10646 304 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ACADMP11310 421 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GGT2P36268 569 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CLDN8P56748 225 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TUBA1BP68363 451 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PRKG2Q13237 762 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MAD2L1Q13257 205 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 RIN1Q13671 783 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 KCNC3Q14003 757 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 LAPTM4AQ15012 233 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZDHHC20Q5W0Z9 365 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GPRIN3Q6ZVF9 776 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TUBA1AQ71U36 451 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 RTL10Q7L3V2 364 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 EID3Q8N140 333 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 FBXO39Q8N4B4 442 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TTC9BQ8N6N2 239 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GOT1L1Q8NHS2 421 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 ANGPTL6Q8NI99 470 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZNF689Q96CS4 500 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 CLIP3Q96DZ5 547 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZNF764Q96H86 408 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 CCDC138Q96M89 665 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 VN1R3Q9BXE9 311 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 DGCR6LQ9BY27 220 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 POLMQ9NP87 494 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 SNX6Q9UNH7 406 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 H0Y626 953 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GFYI3L273 518 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PSMD11O00231 422 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 NPC1O15118 1278 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 HOXA2O43364 376 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 STC2O76061 302 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms