RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 OR10Q1Q8NGQ4 319 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 CCDC115Q96NT0 180 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 ELAC1Q9H777 363 aaKnown RBP12.51□□□□□ -0.41
COL3A1-201ENST00000304636 C14orf105Q9NVL8 296 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 OSER1Q9NX31 292 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 TEX28O15482 410 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
COL3A1-201ENST00000304636 KDM4BO94953 1096 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 ITPKBP27987 946 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 PPM1AP35813 382 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 INHBEP58166 350 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 ATCAYQ86WG3 371 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 NFKBIDQ8NI38 313 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 TSGA13Q96PP4 275 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 HEPHQ9BQS7 1158 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 KCNH6Q9H252 994 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 FAM118AQ9NWS6 357 aa12.51□□□□□ -0.41
COL3A1-201ENST00000304636 STOX2Q9P2F5 926 aaPredicted RBP12.51□□□□□ -0.41
COL3A1-201ENST00000304636 SETD1AO15047 1707 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 FUOMA2VDF0 154 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 C9IYK1 514 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 HSD17B1P14061 328 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ETV4P43268 484 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 GJA9P57773 515 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 STXBP1P61764 594 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ADAM8P78325 824 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TXNL4AP83876 142 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 FAM110CQ1W6H9 321 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CHST4Q8NCG5 386 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 BCL7BQ9BQE9 202 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 FUNDC2Q9BWH2 189 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 SLC6A15Q9H2J7 730 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 HSPE1-MOB4S4R3N1 261 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 PRSS51A0A1B0GVH4 220 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 GGT5P36269 586 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 BTBD16Q32M84 506 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 BPIFB1Q8TDL5 484 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CREB3L1Q96BA8 519 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TMED9Q9BVK6 235 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TRIM36Q9NQ86 728 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 KCTD3Q9Y597 815 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CD1DP15813 335 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 MAGEA2P43356 314 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 DEFA5Q01523 94 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 GRB7Q14451 532 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 UTP4Q969X6 686 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 WACQ9BTA9 647 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CD244Q9BZW8 370 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TIGARQ9NQ88 270 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 AIG1Q9NVV5 245 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 NLE1Q9NVX2 485 aaPredicted RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CDC14AQ9UNH5 594 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 SIGLEC1Q9BZZ2 1709 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 DUXAA6NLW8 204 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 RAB36O95755 333 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ACVR2AP27037 513 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 BLOC1S3Q6QNY0 202 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 C15orf39Q6ZRI6 1047 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TAS1R3Q7RTX0 852 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 NPAS3Q8IXF0 933 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TBX5Q99593 518 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ASPNQ9BXN1 380 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
COL3A1-201ENST00000304636 SLC22A14Q9Y267 594 aa12.5□□□□□ -0.41
COL3A1-201ENST00000304636 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 ITGA10O75578 1167 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 RFPL2O75678 378 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 FOSL2P15408 326 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 KELP23276 732 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 NCBP2P52298 156 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 PIGFQ07326 219 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL3A1-201ENST00000304636 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 MOB2Q70IA6 237 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 BTN2A1Q7KYR7 527 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 OR5AK3PQ8NH89 298 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 XYLT2Q9H1B5 865 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 RNF11Q9Y3C5 154 aa12.49□□□□□ -0.41
COL3A1-201ENST00000304636 COLEC10Q9Y6Z7 277 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms