RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 SLC22A18Q96BI1 424 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 MRM3Q9HC36 420 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ANKHQ9HCJ1 492 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 IFT172Q9UG01 1749 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 JUNP05412 331 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF3P17036 446 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 TOR1AIP1Q5JTV8 583 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
PRKCB-201ENST00000303531 OR14I1A6ND48 311 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 CNTN5O94779 1100 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 CLCNKAP51800 687 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 DGKEP52429 567 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 GRSF1Q12849 480 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 PTPRCAPQ14761 206 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 KLHL6Q8WZ60 621 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TOR3AQ9H497 397 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 UTS2RQ9UKP6 389 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TYROBPO43914 113 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 STATHP02808 62 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 GSTM3P21266 225 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 PTCHD3Q3KNS1 767 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 RICTORQ6R327 1708 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ZC3H3Q8IXZ2 948 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 CHMP1AQ9HD42 196 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TMEM248Q9NWD8 314 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 FGF3P11487 239 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 MVKQ03426 396 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 CRHR2Q13324 411 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 SLITRK4Q8IW52 837 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 SHISA4Q96DD7 197 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 KXD1Q9BQD3 176 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 MOCS1Q9NZB8 636 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 EIF3KQ9UBQ5 218 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 M0QX08 132 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF33AQ06730 810 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TSTQ16762 297 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 PDCD4Q53EL6 469 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 CEACAM20Q6UY09 585 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 MARCH9Q86YJ5 346 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 RGS17Q9UGC6 210 aaPredicted RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 SEMA3AQ14563 771 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 RELL1Q8IUW5 271 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ARNTL2Q8WYA1 636 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 EBLN1P0CF75 366 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 PRKACGP22612 351 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 C6orf89Q6UWU4 347 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ASB18Q6ZVZ8 466 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ARMC10Q8N2F6 343 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 FBRSL1Q9HCM7 1045 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 TXNRD2Q9NNW7 524 aa13.56□□□□□ -0.24
PRKCB-201ENST00000303531 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
PRKCB-201ENST00000303531 ADH5P11766 374 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 FPR1P21462 350 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 CCKBRP32239 447 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 SERINC3Q13530 473 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TPRG1LQ5T0D9 272 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 OR2L3Q8NG85 312 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 OR2AJ1Q8NGZ0 328 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 GRPEL2Q8TAA5 225 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 SLC25A36Q96CQ1 311 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 COQ8BQ96D53 544 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 MND1Q9BWT6 205 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TMEM150CB9EJG8 249 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 SCGNO76038 276 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 ITGB1P05556 798 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 EMX2Q04743 252 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TGFBIQ15582 683 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 MEP1AQ16819 746 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 SLC22A15Q8IZD6 547 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 UCK2Q9BZX2 261 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 CA12O43570 354 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TLX3O43711 291 aaPredicted RBP13.55□□□□□ -0.24
PRKCB-201ENST00000303531 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
PRKCB-201ENST00000303531 PDHA2P29803 388 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 SMSP52788 366 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TPRG1Q6ZUI0 275 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 TXNDC5Q8NBS9 432 aaKnown RBP13.55□□□□□ -0.24
PRKCB-201ENST00000303531 OR5T3Q8NGG3 340 aa13.55□□□□□ -0.24
PRKCB-201ENST00000303531 ERMAPQ96PL5 475 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms