RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 WBP4O75554 376 aaKnown RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 STK16O75716 305 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 ESR1P03372 595 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 SLC19A1P41440 591 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PRIM2P49643 509 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CRISP3P54108 245 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 RAB25P57735 213 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CSNK2BP67870 215 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PCBP1Q15365 356 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 VMACQ2NL98 169 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PARP15Q460N3 678 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MANEALQ5VSG8 457 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 PLET1Q6UQ28 207 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 SLC46A3Q7Z3Q1 461 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 C11orf74Q86VG3 221 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 ZSWIM9Q86XI8 627 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 ZNF717Q9BY31 904 aaPredicted RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 TMEM248Q9NWD8 314 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 AGO1Q9UL18 857 aaKnown RBP11.08□□□□□ -0.64
TRUB1-201ENST00000298746 NEU3Q9UQ49 428 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 MED16Q9Y2X0 877 aa11.08□□□□□ -0.64
TRUB1-201ENST00000298746 A0A0G2JLL6 359 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 MAGEB17A8MXT2 336 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 F8W810 466 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HAS3O00219 553 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 MEN1O00255 615 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ICMTO60725 284 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 AP2A2O94973 939 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ALX3O95076 343 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 DSC3Q14574 896 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SETMARQ53H47 684 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 KLHL17Q6TDP4 642 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 C16orf59Q7L2K0 433 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ZNF438Q7Z4V0 828 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 PRRT2Q7Z6L0 340 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 GPR65Q8IYL9 337 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ATAD1Q8NBU5 361 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 C19orf18Q8NEA5 215 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 GPR151Q8TDV0 419 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 KCNJ9Q92806 393 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ABHD16BQ9H3Z7 469 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ABCB8Q9NUT2 735 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 OSER1Q9NX31 292 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 PCDHGB3Q9Y5G1 929 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 GFRA2O00451 464 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 WNT9AO14904 365 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 RGS13O14921 159 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 INSIG1O15503 277 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CLDN9O95484 217 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SNAI1O95863 264 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SLC10A3P09131 477 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HIST1H2AGP0C0S8 130 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ADORA3P0DMS8 318 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HIST1H2ADP20671 130 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 RGRP47804 291 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 PSEN2P49810 448 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CDC42P60953 191 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 FXNQ16595 210 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ZMAT1Q5H9K5 638 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CTSL3PQ5NE16 218 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 KLHDC8BQ8IXV7 354 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 UBQLNLQ8IYU4 475 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 RASSF5Q8WWW0 418 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HIST1H2AHQ96KK5 128 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 OR5M11Q96RB7 305 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HIST1H2AJQ99878 128 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CPPED1Q9BRF8 314 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 H2AFJQ9BTM1 129 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SMURF1Q9HCE7 757 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SIRT5Q9NXA8 310 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 FBXL12Q9NXK8 326 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SNX7Q9UNH6 387 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 A0A1W2PQ09 198 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 H3BN98 237 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CXCL11O14625 94 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 IRF1P10914 325 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ITPKAP23677 461 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 DGKAP23743 735 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SSTR4P31391 388 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 PTGER3P43115 390 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SEMG2Q02383 582 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 HSPA14Q0VDF9 509 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 GANABQ14697 944 aaKnown RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 TBCEQ15813 527 aaPredicted RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 TLK2Q86UE8 772 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 ZNF598Q86UK7 904 aaKnown RBP11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SLC5A8Q8N695 610 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 SNAPC3Q92966 411 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 PHF21AQ96BD5 680 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 COPS8Q99627 209 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CLMPQ9H6B4 373 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 CSNK1G1Q9HCP0 422 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
TRUB1-201ENST00000298746 FABP12A6NFH5 140 aa11.06□□□□□ -0.64
TRUB1-201ENST00000298746 EPOP01588 193 aa11.06□□□□□ -0.64
TRUB1-201ENST00000298746 CDK1P06493 297 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms