RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CYP2A6P11509 494 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CRATP43155 626 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 MAP2K4P45985 399 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SPCS2Q15005 226 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 LINGO2Q7L985 606 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ADCK2Q7Z695 626 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ECHDC2Q86YB7 292 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CMIPQ8IY22 773 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CAMKVQ8NCB2 501 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FANK1Q8TC84 345 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CPA5Q8WXQ8 436 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FAM46AQ96IP4 442 aaKnown RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF649Q9BS31 505 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HIPK2Q9H2X6 1198 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 STARD7Q9NQZ5 370 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 NLGN3Q9NZ94 848 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 NDRG3Q9UGV2 375 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 H0YIN7 160 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 LALBAP00709 142 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 INHAP05111 366 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 MMP7P09237 267 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ZSCAN5DPP0CG00 497 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CHATP28329 748 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ALDH3B1P43353 468 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CDH8P55286 799 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SLC25A3Q00325 362 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FOXD4Q12950 439 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 RIN1Q13671 783 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ACSBG2Q5FVE4 666 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HLA-DQA1Q5Y7H0 255 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 UNQ6126/PRO20091Q6UXV3 157 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 STT3BQ8TCJ2 826 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 NKD2Q969F2 451 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 KIF12Q96FN5 646 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PRRT1Q99946 306 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 IPPKQ9H8X2 491 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 RAVER2Q9HCJ3 691 aaKnown RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CHRNA9Q9UGM1 479 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FAM237BA0A1B0GVD1 139 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 F5H5T6 163 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CSF3P09919 207 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 H2AFB2P0C5Z0 115 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 THBS3P49746 956 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 AGAP7PQ5VUJ5 663 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 USP51Q70EK9 711 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 OR13J1Q8NGT2 312 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SPON2Q9BUD6 331 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 LIN7BQ9HAP6 207 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM100Q9NV29 134 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PPP1R14DQ9NXH3 145 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SLC17A6Q9P2U8 582 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 KCNS2Q9ULS6 477 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CYP8B1Q9UNU6 501 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 MEGF11A6BM72 1044 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 RNF13O43567 381 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TIPRLO75663 272 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 POU2F1P14859 743 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 KELP23276 732 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PPT1P50897 306 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TPMTP51580 245 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 LSM3P62310 102 aaKnown RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PRKCDQ05655 676 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ERMP1Q7Z2K6 904 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 GALNT13Q8IUC8 556 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 DNAAF1Q8NEP3 725 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 OR5T3Q8NGG3 340 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FGGYQ96C11 551 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TXNDC15Q96J42 360 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 RAB11FIP5Q9BXF6 653 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 POLR1EQ9GZS1 481 aaKnown RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 NMRK2Q9NPI5 230 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TMPRSS11EQ9UL52 423 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 FAM96BQ9Y3D0 163 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ADAMTS3O15072 1205 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 STK17BO94768 372 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 TGFB1P01137 390 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CHRNA1P02708 482 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ALPIP09923 528 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PHKG2P15735 406 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 MAKP20794 623 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CDCA2Q69YH5 1023 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 BLOC1S3Q6QNY0 202 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 USP49Q70CQ1 688 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PSD4Q8NDX1 1056 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 NSMAFQ92636 917 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 MBOAT7Q96N66 472 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 PKP4Q99569 1192 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 SYT3Q9BQG1 590 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 CLMPQ9H6B4 373 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ZNRF3Q9ULT6 936 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HMX3A6NHT5 357 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 UNC119BA6NIH7 251 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF35P13682 527 aa4.73□□□□□ -1.65
CSMD3-201ENST00000297405 HSD17B2P37059 387 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms