RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C1orf146Q5VVC0 180 aa15□□□□□ -0.01
LSM6-201ENST00000296581 NXPE4Q6UWF7 544 aa15□□□□□ -0.01
LSM6-201ENST00000296581 EFCAB3Q8N7B9 438 aa15□□□□□ -0.01
LSM6-201ENST00000296581 OR7G3Q8NG95 312 aa15□□□□□ -0.01
LSM6-201ENST00000296581 FCRL1Q96LA6 429 aa15□□□□□ -0.01
LSM6-201ENST00000296581 FERD3LQ96RJ6 166 aa15□□□□□ -0.01
LSM6-201ENST00000296581 FOXQ1Q9C009 403 aa15□□□□□ -0.01
LSM6-201ENST00000296581 MVB12BQ9H7P6 319 aa15□□□□□ -0.01
LSM6-201ENST00000296581 CROTQ9UKG9 612 aa15□□□□□ -0.01
LSM6-201ENST00000296581 FBXL21Q9UKT6 434 aa15□□□□□ -0.01
LSM6-201ENST00000296581 MAGEA13PA6NCF6 341 aa15□□□□□ -0.01
LSM6-201ENST00000296581 ZNF217O75362 1048 aa15□□□□□ -0.01
LSM6-201ENST00000296581 SORBS2O94875 1100 aaKnown RBP15□□□□□ -0.01
LSM6-201ENST00000296581 BCKDHAP12694 445 aa15□□□□□ -0.01
LSM6-201ENST00000296581 NUDT1P36639 197 aa15□□□□□ -0.01
LSM6-201ENST00000296581 THOP1P52888 689 aa15□□□□□ -0.01
LSM6-201ENST00000296581 TLR1Q15399 786 aa15□□□□□ -0.01
LSM6-201ENST00000296581 ZNF423Q2M1K9 1284 aa15□□□□□ -0.01
LSM6-201ENST00000296581 MED27Q6P2C8 311 aa15□□□□□ -0.01
LSM6-201ENST00000296581 WASH2PQ6VEQ5 465 aa15□□□□□ -0.01
LSM6-201ENST00000296581 LAS2Q8IYD9 372 aa15□□□□□ -0.01
LSM6-201ENST00000296581 LIX1Q8N485 282 aa15□□□□□ -0.01
LSM6-201ENST00000296581 SMPDL3AQ92484 453 aa15□□□□□ -0.01
LSM6-201ENST00000296581 BIRC7Q96CA5 298 aa15□□□□□ -0.01
LSM6-201ENST00000296581 REPS1Q96D71 796 aa15□□□□□ -0.01
LSM6-201ENST00000296581 CAMK1GQ96NX5 476 aa15□□□□□ -0.01
LSM6-201ENST00000296581 GPATCH1Q9BRR8 931 aaKnown RBP15□□□□□ -0.01
LSM6-201ENST00000296581 WASH6PQ9NQA3 447 aa15□□□□□ -0.01
LSM6-201ENST00000296581 IMP3Q9NV31 184 aaKnown RBP15□□□□□ -0.01
LSM6-201ENST00000296581 PNMA8BQ9ULN7 279 aaPredicted RBP15□□□□□ -0.01
LSM6-201ENST00000296581 POMPQ9Y244 141 aa15□□□□□ -0.01
LSM6-201ENST00000296581 CCDC154A6NI56 674 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PDZK1P1A8MUH7 402 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PRPS2P11908 318 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 AMD1P17707 334 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 RABIFP47224 123 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 LAPTM5Q13571 262 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 CEACAM7Q14002 265 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 SLBPQ14493 270 aaKnown RBP eCLIP14.99□□□□□ -0.01
LSM6-201ENST00000296581 PTGR1Q14914 329 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 RPE65Q16518 533 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PAGE2BQ5JRK9 111 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 ABRAXAS1Q6UWZ7 409 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 Q6ZSR6 202 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 LPCAT2Q7L5N7 544 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 RNF175Q8N4F7 328 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 ARL10Q8N8L6 244 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 APIPQ96GX9 242 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 METTL2AQ96IZ6 378 aaKnown RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 PCBD2Q9H0N5 130 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PRDM8Q9NQV8 689 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 LEF1Q9UJU2 399 aaPredicted RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 TSC22D4Q9Y3Q8 395 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 COMMD3-BMI1R4GMX3 469 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 A0A1W2PPV9 198 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 FXYD1O00168 92 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 MAPK1P28482 360 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 TMED1Q13445 227 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 RAB42Q8N4Z0 105 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 MINDY1Q8N5J2 469 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 GLB1L3Q8NCI6 653 aaPredicted RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 GATA6Q92908 595 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 TSACCQ96A04 125 aaPredicted RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 VPS33AQ96AX1 596 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 MTERF1Q99551 399 aaKnown RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 NRTNQ99748 197 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 HOPXQ9BPY8 73 aaPredicted RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 GPR174Q9BXC1 333 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 SPAG4Q9NPE6 437 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PRDM6Q9NQX0 595 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 VPS29Q9UBQ0 182 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PCOLCE2Q9UKZ9 415 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 PAIP2BQ9ULR5 123 aaKnown RBP14.99□□□□□ -0.01
LSM6-201ENST00000296581 DLGAP4Q9Y2H0 992 aa14.99□□□□□ -0.01
LSM6-201ENST00000296581 IGHV1OR15-9A0A0B4J2B8 117 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 PIPSLA2A3N6 862 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 H0Y3Z8 333 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 SCAMP1O15126 338 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 MTHFD1P11586 935 aaKnown RBP14.98□□□□□ -0.01
LSM6-201ENST00000296581 PKLRP30613 574 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 SRP54P61011 504 aaKnown RBP14.98□□□□□ -0.01
LSM6-201ENST00000296581 FOXM1Q08050 763 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 ALG11Q2TAA5 492 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 LAYNQ6UX15 382 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 FAM9CQ8IZT9 166 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 SIX5Q8N196 739 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 LINC01555Q8NAE3 123 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 OR13H1Q8NG92 308 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 HUS1BQ8NHY5 278 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
LSM6-201ENST00000296581 RAB11FIP5Q9BXF6 653 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 CHRDQ9H2X0 955 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 DCLRE1BQ9H816 532 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 PELI2Q9HAT8 420 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 GPR27Q9NS67 375 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 GID8Q9NWU2 228 aa14.98□□□□□ -0.01
LSM6-201ENST00000296581 TRNAU1APQ9NX07 287 aaKnown RBP14.98□□□□□ -0.01
LSM6-201ENST00000296581 SCHIP1Q9P0W5 487 aaPredicted RBP14.98□□□□□ -0.01
LSM6-201ENST00000296581 TMEM181Q9P2C4 612 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms