RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 CAPN1P07384 714 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 GABRG2P18507 467 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 IL12AP29459 219 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 TPMTP51580 245 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 TIGD2Q4W5G0 525 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 VRK3Q8IV63 474 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 SFRP1Q8N474 314 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 TRIML2Q8N7C3 387 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 OR52B6Q8NGF0 335 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 OR8J3Q8NGG0 315 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 DNAJB14Q8TBM8 379 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 ADAMTS16Q8TE57 1224 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 POP5Q969H6 163 aaKnown RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 NMD3Q96D46 503 aaKnown RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 ADI1Q9BV57 179 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 YTHDF1Q9BYJ9 559 aaKnown RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 SLC32A1Q9H598 525 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 MBNL1Q9NR56 388 aaKnown RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 ATG2BQ96BY7 2078 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 A0A087WXM4 84 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 SAC3D1A6NKF1 404 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 C9JVG2 144 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 SLC28A1O00337 649 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 DLGAP1O14490 977 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 ANKRD28O15084 1053 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 IGLV3-19P01714 112 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 ETS2P15036 469 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 KELP23276 732 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 PBLDP30039 288 aaPredicted RBP16.26■□□□□ 0.19
CPSF4-201ENST00000292476 OXTRP30559 389 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 HSPA7P48741 367 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 MERTKQ12866 999 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 TRAF3Q13114 568 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 SLC36A3Q495N2 470 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
CPSF4-201ENST00000292476 RABL3Q5HYI8 236 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 CYP20A1Q6UW02 462 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 PGBD3Q8N328 593 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 OXR1Q8N573 874 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 GLB1L3Q8NCI6 653 aaPredicted RBP16.26■□□□□ 0.19
CPSF4-201ENST00000292476 CLDN23Q96B33 292 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 FBXL8Q96CD0 374 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 MPP4Q96JB8 637 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 CCDC115Q96NT0 180 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 IPPKQ9H8X2 491 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 ASB1Q9Y576 335 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 CEPT1Q9Y6K0 416 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 MUC6Q6W4X9 2439 aa16.26■□□□□ 0.19
CPSF4-201ENST00000292476 TRPM6Q9BX84 2022 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ZNF701M0R085 212 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-201ENST00000292476 PDLIM1O00151 329 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 FPGTO14772 594 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ACOX3O15254 700 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 TAPBPO15533 448 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 LDLRP01130 860 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 RPN2P04844 631 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 CDH1P12830 882 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 HOXB6P17509 224 aaKnown RBP16.25■□□□□ 0.19
CPSF4-201ENST00000292476 CDH2P19022 906 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-201ENST00000292476 HMOX2P30519 316 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 NUDT1P36639 197 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 TCF15Q12870 199 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ABRQ12979 859 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 PWP1Q13610 501 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 FGL2Q14314 439 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 NR6A1Q15406 480 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 FBXO48Q5FWF7 155 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 IL27RAQ6UWB1 636 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 UNC5DQ6UXZ4 953 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 DLEU7Q6UYE1 221 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 Q6ZS52 159 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ZNF547Q8IVP9 402 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 FAM47BQ8NA70 645 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 OR4F6Q8NGB9 312 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 DNAJB8Q8NHS0 232 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 HMGB4Q8WW32 186 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 FOXJ1Q92949 421 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ZBTB18Q99592 522 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 C1orf50Q9BV19 199 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 NTMT1Q9BV86 223 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 TIMMDC1Q9NPL8 285 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 SPATA6Q9NWH7 488 aaPredicted RBP16.25■□□□□ 0.19
CPSF4-201ENST00000292476 USP36Q9P275 1121 aaKnown RBP16.25■□□□□ 0.19
CPSF4-201ENST00000292476 TRPS1Q9UHF7 1281 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 ACSL5Q9ULC5 683 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 TMEM98Q9Y2Y6 226 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 AK5Q9Y6K8 562 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 CACNA1IQ9P0X4 2223 aa16.25■□□□□ 0.19
CPSF4-201ENST00000292476 RNF103-CHMP3A0A140T963 221 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 TMEM202A6NGA9 273 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 RGS14O43566 566 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 EBLN1P0CF75 366 aa16.24■□□□□ 0.19
CPSF4-201ENST00000292476 VARSP26640 1264 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 ARL1P40616 181 aaPredicted RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 RPS9P46781 194 aaKnown RBP16.24■□□□□ 0.19
CPSF4-201ENST00000292476 CDK9P50750 372 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms