RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 TCF20Q9UGU0 1960 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 PTGES3LE9PB15 166 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 M0R3G1 203 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 KPNA3O00505 521 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 HS6ST1O60243 411 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 HTR6P50406 440 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 LYPLAL1Q5VWZ2 237 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 GOLGA7Q7Z5G4 137 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ZCCHC7Q8N3Z6 543 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ZNF557Q8N988 423 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ZFP90Q8TF47 636 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM162AQ96A26 154 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ZBTB18Q99592 522 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 CCDC90BQ9GZT6 254 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ELOVL7A1L3X0 281 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 HEPACAM2A8MVW5 462 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 UPK3BL1B0FP48 263 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 UPK3BL2E5RIL1 263 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 KDM1AO60341 852 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 RETP07949 1114 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 TGM1P22735 817 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 VIPR1P32241 457 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 DCTP40126 519 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 EMX1Q04741 257 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 DUSP6Q16828 381 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 AP5B1Q2VPB7 878 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 ETFBKMTQ8IXQ9 262 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 CADM3Q8N126 398 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 MFSD4AQ8N468 514 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 OR10A6Q8NH74 314 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 RORBQ92753 470 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 WRAP53Q9BUR4 548 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 THUMPD3Q9BV44 507 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 RIOK2Q9BVS4 552 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 DPP7Q9UHL4 492 aa17.76■□□□□ 0.43
PDLIM3-201ENST00000284767 FADS2P1A8MWK0 482 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 CXCR6O00574 342 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 OR7A17O14581 309 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ADH1CP00326 375 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ITGAMP11215 1152 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 PIK3CGP48736 1102 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 CD300CQ08708 224 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 CDK5R2Q13319 367 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 LAPTM5Q13571 262 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 BOP1Q14137 746 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 PCBP2Q15366 365 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 BCL2A1Q16548 175 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 TMEM53Q6P2H8 277 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 PARS2Q7L3T8 475 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 HIPK1Q86Z02 1210 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 SKA2Q8WVK7 121 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 PPP3R2Q96LZ3 170 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 C19orf43Q9BQ61 176 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 FAM83DQ9H4H8 585 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ZMYM5Q9UJ78 669 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 TNPO3Q9Y5L0 923 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 NUP210Q8TEM1 1887 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 OR2AG2A6NM03 316 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 RAD51BO15315 384 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 HOXC11O43248 304 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 PRKD3O94806 890 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 IL1RNP18510 177 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ACVR2AP27037 513 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 GRK3P35626 688 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 GTF2H2Q13888 395 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ZNF805Q5CZA5 627 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 GTF2H2CQ6P1K8 395 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 DCP2Q8IU60 420 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 ARL10Q8N8L6 244 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 SETD9Q8NE22 299 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 GTF2H4Q92759 462 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 SMARCD2Q92925 531 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 RHBDF1Q96CC6 855 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 NKX2-4Q9H2Z4 354 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 OARD1Q9Y530 152 aa17.75■□□□□ 0.43
PDLIM3-201ENST00000284767 BCKDKO14874 412 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 LINC01565O15544 149 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 E2F6O75461 281 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 NTRK1P04629 796 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 XPAP23025 273 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 FSHRP23945 695 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 TANGO2Q6ICL3 276 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 OR4F6Q8NGB9 312 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 PHF10Q8WUB8 498 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 IPPKQ9H8X2 491 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 DCAF13Q9NV06 445 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 IGLV3-16A0A075B6K0 115 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 PTPN5P54829 565 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 IFITM3Q01628 133 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 INAQ16352 499 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 MAPKAPK3Q16644 382 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 SMU1Q2TAY7 513 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 ADPRMQ3LIE5 342 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 PLA2G4EQ3MJ16 856 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 RFTN2Q52LD8 501 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 C1QTNF12Q5T7M4 302 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 ANKRD34AQ69YU3 496 aa17.74■□□□□ 0.43
PDLIM3-201ENST00000284767 PLEKHG7Q6ZR37 379 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms