RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TTC26A0AVF1 554 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 GRXCR1A8MXD5 290 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TARM1B6A8C7 271 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 PPP6CO00743 305 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SMAD9O15198 467 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 OGTO15294 1046 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 GPAA1O43292 621 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 LANCL1O43813 399 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 STRNO43815 780 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 VPS4BO75351 444 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MOSPD3O75425 235 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 WDR47O94967 919 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 AGFG2O95081 481 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CSTAP01040 98 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ODC1P11926 461 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TCF4P15884 667 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CYP2B6P20813 491 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CYP3A7P24462 503 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CCND3P30281 292 aaPredicted RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 GJC1P36383 396 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CETN2P41208 172 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 PTPN9P43378 593 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CSNK2BP67870 215 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 HSD11B2P80365 405 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ADORA2A-AS1P86434 159 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SHC2P98077 582 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TIAL1Q01085 375 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD44-202ENST00000278385 SEMA3BQ13214 749 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ALKBH1Q13686 389 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 IL18Q14116 193 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 RNPS1Q15287 305 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 NAB2Q15742 525 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 PDK4Q16654 411 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 AP5B1Q2VPB7 878 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 BEAN1Q3B7T3 259 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 NKAIN1Q4KMZ8 207 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 C10orf120Q5SQS8 335 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ABHD17BQ5VST6 288 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 GPR142Q7Z601 462 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CLNKQ7Z7G1 428 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MRPL10Q7Z7H8 261 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 MRGPRGQ86SM5 289 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MRGPREQ86SM8 312 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 EFCAB13Q8IY85 973 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 TMEM132CQ8N3T6 1108 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CSGALNACT2Q8N6G5 542 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 C11orf44Q8N8P7 122 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SLC44A5Q8NCS7 719 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 BEND2Q8NDZ0 799 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 GOLGA5Q8TBA6 731 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 DDI1Q8WTU0 396 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 U2AF1L4Q8WU68 220 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 LIPHQ8WWY8 451 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 CDKL2Q92772 493 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ISG20Q96AZ6 181 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 TRMT61AQ96FX7 289 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 HMCESQ96FZ2 354 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MARS2Q96GW9 593 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 BOD1Q96IK1 185 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 RPGRIP1Q96KN7 1286 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 KLHL32Q96NJ5 620 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ANKRD27Q96NW4 1050 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SORCS2Q96PQ0 1159 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MTMR9Q96QG7 549 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 PANX3Q96QZ0 392 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SMOQ99835 787 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ATG10Q9H0Y0 220 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 SLCO5A1Q9H2Y9 848 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 ZNF768Q9H5H4 540 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 CXorf36Q9H7Y0 433 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 WDR6Q9NNW5 1121 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 TXNRD2Q9NNW7 524 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MTMR4Q9NYA4 1195 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 EHD3Q9NZN3 535 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 NYAP2Q9P242 653 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 KLHL8Q9P2G9 620 aaPredicted RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 CHRNA9Q9UGM1 479 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 KCNE5Q9UJ90 142 aa4.43□□□□□ -1.7
CD44-202ENST00000278385 MRPS17Q9Y2R5 130 aaKnown RBP4.43□□□□□ -1.7
CD44-202ENST00000278385 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 FAM237AA0A1B0GTK4 181 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HELTA6NFD8 242 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ANKDD1BA6NHY2 528 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 TMEM200CA6NKL6 621 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ZNF213O14771 459 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ANKRD28O15084 1053 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ALOX15BO15296 676 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 AKAP8O43823 692 aaKnown RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 ATG13O75143 517 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CNMDO75829 334 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 PDE9AO76083 593 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 GLCEO94923 617 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 NKX2-2O95096 273 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 SLC25A27O95847 323 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms