RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MAGEB17A8MXT2 336 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CPNE3O75131 537 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 EEDO75530 441 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 DHFRP00374 187 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 IGLV3-25P01717 112 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 EMX2Q04743 252 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 GRIK2Q13002 908 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 IL18Q14116 193 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 ANXA8L1Q5VT79 327 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 KIAA1614Q5VZ46 1190 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CERS6Q6ZMG9 384 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 GTPBP3Q969Y2 492 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 GVINP1Q7Z2Y8 2422 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 A0A1W2PRU2 124 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 A8MV72 311 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 PRKCGP05129 697 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 IGFBP6P24592 240 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 ACVRL1P37023 503 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 PTPN5P54829 565 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 GNG2P59768 71 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 CLCA4Q14CN2 919 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 ZFP90Q8TF47 636 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 FATE1Q969F0 183 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC38A4Q969I6 547 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 KCNC2Q96PR1 638 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 TMEM246Q9BRR3 403 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 PCDHGA4Q9Y5G9 962 aa11.22□□□□□ -0.61
CLSTN3-201ENST00000266546 H0YC42 278 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 DFNA5O60443 496 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 CCNDBP1O95273 360 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 PAPSS2O95340 614 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 C9P02748 559 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 FUCA1P04066 466 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 ANGPT1Q15389 498 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 ALFQ53S48 1182 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SYCE2Q6PIF2 218 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 DCAF4L2Q8NA75 395 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 PEX13Q92968 403 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC30A3Q99726 388 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 NLNQ9BYT8 704 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 DERL2Q9GZP9 239 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 FADS2P1A8MWK0 482 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 FFAR2O15552 330 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SEMA3DO95025 777 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 MATN4O95460 622 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 NFATC1O95644 943 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 CATP04040 527 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 CHRM5P08912 532 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 IFI30P13284 250 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 ANXA8P13928 327 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 MATN1P21941 496 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 TCEA1P23193 301 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SDC2P34741 201 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 PTGER3P43115 390 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 RORCP51449 518 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SMU1Q2TAY7 513 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 C5orf22Q49AR2 442 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 DDI2Q5TDH0 399 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 RAB42Q8N4Z0 105 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 C9orf43Q8TAL5 461 aaPredicted RBP11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 SH3RF2Q8TEC5 729 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 REPS1Q96D71 796 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 OR2B2Q9GZK3 357 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 AHSPQ9NZD4 102 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 PTGFRNQ9P2B2 879 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 ZSWIM8A7E2V4 1837 aa11.21□□□□□ -0.61
CLSTN3-201ENST00000266546 FAM172BPA6NC97 362 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 MPZL2O60487 215 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 CD1DP15813 335 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 EPORP19235 508 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 EFNA1P20827 205 aaPredicted RBP11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 GPX3P22352 226 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 ZDHHC20Q5W0Z9 365 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 PRR23CQ6ZRP0 262 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 KRT74Q7RTS7 529 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 PEX5LQ8IYB4 626 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 OR4F6Q8NGB9 312 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 OR8J3Q8NGG0 315 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 WFIKKN2Q8TEU8 576 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 IGSF8Q969P0 613 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 ENPP5Q9UJA9 477 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 STOML2Q9UJZ1 356 aa11.21□□□□□ -0.62
CLSTN3-201ENST00000266546 TGM5O43548 720 aa11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 SSNA1O43805 119 aa11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 ATF6P18850 670 aa11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 CD68P34810 354 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 AGTR2P50052 363 aa11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 SMIM11AP58511 58 aa11.2□□□□□ -0.62
CLSTN3-201ENST00000266546 ABHD18Q0P651 414 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms