RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 KDELR2P33947 212 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 OR2T11Q8NH01 316 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 RHEBL1Q8TAI7 183 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 NPLOC4Q8TAT6 608 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 MAELQ96JY0 434 aaKnown RBP16.63■□□□□ 0.25
SRF-201ENST00000265354 UBXN10Q96LJ8 280 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 RAD18Q9NS91 495 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ING3Q9NXR8 418 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ADAMTSL3P82987 1691 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ZNF701M0R085 212 aaPredicted RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 MATN4O95460 622 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 SSTR4P31391 388 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 MANFP55145 182 aaKnown RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 ABHD18Q0P651 414 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 SERINC3Q13530 473 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 TRIM40Q6P9F5 258 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 C1orf52Q8N6N3 182 aaKnown RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 RAET1EQ8TD07 263 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PCDHB1Q9Y5F3 818 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PCDHA9Q9Y5H5 950 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 ADAMDEC1O15204 470 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 CLEC12AQ5QGZ9 265 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 TIGD4Q8IY51 512 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 MMP27Q9H306 513 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 TAS2R9Q9NYW1 312 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PLK4O00444 970 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PAPSS2O95340 614 aaPredicted RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 ALDH1A1P00352 501 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 FGF4P08620 206 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 ITGA2P17301 1181 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 TIE1P35590 1138 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 LGALS3BPQ08380 585 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 23.6
SRF-201ENST00000265354 PCBP2Q15366 365 aaKnown RBP eCLIP16.62■□□□□ 0.253e-8■■□□□ 12.4
SRF-201ENST00000265354 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 IQCCQ4KMZ1 466 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 FAM83FQ8NEG4 500 aaPredicted RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 MRPS31Q92665 395 aaKnown RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 ATOH8Q96SQ7 321 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 ZNF382Q96SR6 550 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 ASPNQ9BXN1 380 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 MMP28Q9H239 520 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 EQTNQ9NQ60 294 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 B3GALNT1O75752 331 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 DNAJB1P25685 340 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 CD40LGP29965 261 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 PPP2R1BP30154 601 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 CREMQ03060 361 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 AGMOQ6ZNB7 445 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 MAGEH1Q9H213 219 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 CDV3Q9UKY7 258 aaKnown RBP16.62■□□□□ 0.25
SRF-201ENST00000265354 CFL2Q9Y281 166 aa16.62■□□□□ 0.25
SRF-201ENST00000265354 SSNA1O43805 119 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 GPR32O75388 356 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 CH25HO95992 272 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 UGT2B15P54855 530 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 TARDBPQ13148 414 aaKnown RBP eCLIP16.61■□□□□ 0.252e-8■■■■■ 34.7
SRF-201ENST00000265354 UGT8Q16880 541 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 KDELC1Q6UW63 502 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 CERS6Q6ZMG9 384 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 ZNF280BQ86YH2 543 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
SRF-201ENST00000265354 GPRC5BQ9NZH0 403 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 BAIAP2Q9UQB8 552 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 SLC28A2O43868 658 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 IFNW1P05000 195 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 NOS3P29474 1203 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 YBX1P67809 324 aaKnown RBP16.61■□□□□ 0.25
SRF-201ENST00000265354 RHAGQ02094 409 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 HSPB3Q12988 150 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 TMCO6Q96DC7 493 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 NECTIN4Q96NY8 510 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 MGLLQ99685 303 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 NEURL2Q9BR09 285 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 SEC14L3Q9UDX4 400 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 LAMB1P07942 1786 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 H3BM21 787 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 FXYD1O00168 92 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 DYRK3O43781 588 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 B3GALT4O96024 378 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 C7P10643 843 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 PRPS2P11908 318 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 ATP13A5Q4VNC0 1218 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 LIPKQ5VXJ0 399 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 USP45Q70EL2 814 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 TICAM1Q8IUC6 712 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 AQP11Q8NBQ7 271 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 C11orf24Q96F05 449 aaPredicted RBP16.61■□□□□ 0.25
SRF-201ENST00000265354 MCMBPQ9BTE3 642 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 PCDHB8Q9UN66 801 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 SNX7Q9UNH6 387 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 ABCG2Q9UNQ0 655 aa16.61■□□□□ 0.25
SRF-201ENST00000265354 SEPT4O43236 478 aa16.6■□□□□ 0.25
SRF-201ENST00000265354 PDYNP01213 254 aa16.6■□□□□ 0.25
SRF-201ENST00000265354 HRH2P25021 359 aa16.6■□□□□ 0.25
SRF-201ENST00000265354 MAGEA12P43365 314 aa16.6■□□□□ 0.25
SRF-201ENST00000265354 PGFP49763 221 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms