RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RHCGQ9UBD6 479 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 TMEM98Q9Y2Y6 226 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 PCDHA9Q9Y5H5 950 aa19.26■□□□□ 0.67
CSPG5-201ENST00000264723 SH3PXD2BA1X283 911 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 FXYD1O00168 92 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 C8GP07360 202 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 CST5P28325 142 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 ZNF140P52738 457 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MEF2AQ02078 507 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 ELP6Q0PNE2 266 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 CTSL3PQ5NE16 218 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 ZDHHC20Q5W0Z9 365 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 PALMDQ9NP74 551 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 EQTNQ9NQ60 294 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 H0YJX3 145 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TMEM189-UBE2V1I3L0A0 370 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 PSMD11O00231 422 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 VIPP01282 170 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 BPIP17213 487 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 UGT3A2Q3SY77 523 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 CCDC92Q53HC0 331 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 FRG2Q64ET8 278 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 CLECL1Q8IZS7 167 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TCAIMQ8N3R3 496 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 SVOPLQ8N434 492 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MAL2Q969L2 176 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 FRG2BQ96QU4 278 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MSRAQ9UJ68 235 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 ERN1O75460 977 aaKnown RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 PENKP01210 267 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 ADH5P11766 374 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TPTEP56180 551 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MXD1Q05195 221 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 RAPSNQ13702 412 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 RAB33AQ14088 237 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MANEALQ5VSG8 457 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 DEF8Q6ZN54 512 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 AMER2Q8N7J2 671 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 CXorf40BQ96DE9 158 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 IL4I1Q96RQ9 567 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 IL26Q9NPH9 171 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TTC34A8MYJ7 566 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 DNTTP04053 509 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 NR2F1P10589 423 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 MED27Q6P2C8 311 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 STARD8Q92502 1023 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 UBE2E3Q969T4 207 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TOR4AQ9NXH8 423 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 TUBA8Q9NY65 449 aaPredicted RBP19.25■□□□□ 0.67
CSPG5-201ENST00000264723 GPRC5BQ9NZH0 403 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 IL36AQ9UHA7 158 aa19.25■□□□□ 0.67
CSPG5-201ENST00000264723 RP1L1Q8IWN7 2480 aaPredicted RBP19.24■□□□□ 0.67
CSPG5-201ENST00000264723 E2F3O00716 465 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 OR10H3O60404 316 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 CD247P20963 164 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 NCS1P62166 190 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 VITQ6UXI7 678 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 HSH2DQ96JZ2 352 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 DUSP26Q9BV47 211 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 IL17CQ9P0M4 197 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 ENTPD4Q9Y227 616 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 PCDHGA11Q9Y5H2 935 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 EFCAB9A8MZ26 197 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 MOGQ16653 247 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 NCEH1Q6PIU2 408 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 BADQ92934 168 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 CCDC177Q9NQR7 707 aaPredicted RBP19.24■□□□□ 0.67
CSPG5-201ENST00000264723 FZD4Q9ULV1 537 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 GSAPA4D1B5 854 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 FAM220BPB1ANY3 271 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 PLK4O00444 970 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 ACP5P13686 325 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 NRIP1P48552 1158 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 RPS3AP61247 264 aaKnown RBP19.24■□□□□ 0.67
CSPG5-201ENST00000264723 SMN1Q16637 294 aaKnown RBP19.24■□□□□ 0.67
CSPG5-201ENST00000264723 RBM48Q5RL73 367 aaKnown RBP19.24■□□□□ 0.67
CSPG5-201ENST00000264723 RFLNAQ6ZTI6 216 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 CYP4Z1Q86W10 505 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 HOMEZQ8IX15 550 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 LKAAEAR1Q8TD35 194 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 KCNS3Q9BQ31 491 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 SPHK2Q9NRA0 654 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 DLGAP4Q9Y2H0 992 aa19.24■□□□□ 0.67
CSPG5-201ENST00000264723 LTBP1Q14766 1721 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 DRGXA6NNA5 263 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 POP7O75817 140 aaKnown RBP19.23■□□□□ 0.67
CSPG5-201ENST00000264723 APOFQ13790 326 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 ATAT1Q5SQI0 421 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 FAR1Q8WVX9 515 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 OVCA2Q8WZ82 227 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 PRPS2P11908 318 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 GGT1P19440 569 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 TACR1P25103 407 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 SLC8B1Q6J4K2 584 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 BRAT1Q6PJG6 821 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 PTCHD4Q6ZW05 846 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 GPR65Q8IYL9 337 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 SLC34A3Q8N130 599 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 TCEAL4Q96EI5 215 aa19.23■□□□□ 0.67
CSPG5-201ENST00000264723 PLAGL1Q9UM63 463 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms