RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ATG9BQ674R7 924 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ADCK2Q7Z695 626 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 CCDC74AQ96AQ1 378 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GRAMD1AQ96CP6 724 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 OR52B2Q96RD2 323 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 HAUS8Q9BT25 410 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 DPH7Q9BTV6 452 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TWSG1Q9GZX9 223 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ABCG4Q9H172 646 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 KCNK4Q9NYG8 393 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 GPRC5BQ9NZH0 403 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 TRPS1Q9UHF7 1281 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
SNRNP40-201ENST00000263694 ZFHX2Q9C0A1 2572 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 IGHV1OR21-1A0A087WYE8 117 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 LILRA5A6NI73 299 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 SDHDO14521 159 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 NUDT21O43809 227 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 LCMT2O60294 686 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 PCNAP12004 261 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 ALOX15P16050 662 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 GLB1P16278 677 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 CMPK1P30085 196 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 CASP2P42575 452 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 ARFIP2P53365 341 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 GFERP55789 205 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 CSNK1G2P78368 415 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 CFHR1Q03591 330 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 DDX39BQ13838 428 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 KIR2DS3Q14952 304 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 RBBP5Q15291 538 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 NR0B2Q15466 257 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 LIPJQ5W064 366 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 GRHL2Q6ISB3 625 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 ARMC6Q6NXE6 501 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 IRGCQ6NXR0 463 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 SPESP1Q6UW49 350 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 FAM92BQ6ZTR7 304 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 USP53Q70EK8 1073 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 FAM129CQ86XR2 697 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 NCSTNQ92542 709 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 PTCD3Q96EY7 689 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 SEC16BQ96JE7 1060 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 PHOX2BQ99453 314 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 MTERF1Q99551 399 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 PRRX2Q99811 253 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 DUSP23Q9BVJ7 150 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 PCBD2Q9H0N5 130 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 SYNPO2LQ9H987 977 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 UCK1Q9HA47 277 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 SEMA4GQ9NTN9 838 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 TMEM9Q9P0T7 183 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 NCDNQ9UBB6 729 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 KLHL3Q9UH77 587 aa9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 G3BP2Q9UN86 482 aaKnown RBP9.36□□□□□ -0.91
SNRNP40-201ENST00000263694 C2orf74A8MZ97 194 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 HAT1O14929 419 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 GDF9O60383 454 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 ULK1O75385 1050 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 SNUPNO95149 360 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 LMNAP02545 664 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 SPTBP11277 2137 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 MAGP20916 626 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 NBL1P41271 181 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 CAPZBP47756 277 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 CCR8P51685 355 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 CYP4F2P78329 520 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 HMGCS1Q01581 520 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 PCDH1Q08174 1060 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 TUBB3Q13509 450 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 TBCCQ15814 346 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 ZIC1Q15915 447 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 NXNQ6DKJ4 435 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 FCRL6Q6DN72 434 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 Q6ZSR9 355 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 EFL1Q7Z2Z2 1120 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 ALYREFQ86V81 257 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 OOSP2Q86WS3 158 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 AVL9Q8NBF6 648 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 ABHD11Q8NFV4 315 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 OR7G3Q8NG95 312 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 OR4K1Q8NGD4 311 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 RHBDD1Q8TEB9 315 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 SELENOMQ8WWX9 145 aa9.35□□□□□ -0.91
SNRNP40-201ENST00000263694 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms