RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HOXB9P17482 250 aaPredicted RBP16.92■□□□□ 0.3
TRAM1-201ENST00000262213 ATF6P18850 670 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 GATMP50440 423 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 TAF1CQ15572 869 aaPredicted RBP16.92■□□□□ 0.3
TRAM1-201ENST00000262213 ZNF181Q2M3W8 571 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRAM1-201ENST00000262213 UBE2UQ5VVX9 321 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 CYP2U1Q7Z449 544 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 SPPL2AQ8TCT8 520 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 TXNDC15Q96J42 360 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 BBS2Q9BXC9 721 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 TMEM184CQ9NVA4 438 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 ASIC5Q9NY37 505 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 KLHL3Q9UH77 587 aa16.92■□□□□ 0.3
TRAM1-201ENST00000262213 BNIP3LO60238 219 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 ASGR1P07306 291 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 PRPS2P11908 318 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 CASP3P42574 277 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 IFITM2Q01629 132 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 HSPA14Q0VDF9 509 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 DUOXA1Q1HG43 343 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 ZXDCQ2QGD7 858 aaPredicted RBP16.91■□□□□ 0.3
TRAM1-201ENST00000262213 SMU1Q2TAY7 513 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 CYP27C1Q4G0S4 372 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 CXorf57Q6NSI4 855 aaKnown RBP16.91■□□□□ 0.3
TRAM1-201ENST00000262213 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
TRAM1-201ENST00000262213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.91■□□□□ 0.3
TRAM1-201ENST00000262213 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 AMER2Q8N7J2 671 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 CEP295NLQ96MC4 621 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 KCNS3Q9BQ31 491 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 CDADC1Q9BWV3 514 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 TPK1Q9H3S4 243 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 A0A1B0GVM2 712 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 MAGEB17A8MXT2 336 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 COCHO43405 550 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 C9P02748 559 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 RPL17P18621 184 aaKnown RBP16.91■□□□□ 0.3
TRAM1-201ENST00000262213 PAX3P23760 479 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 ELP6Q0PNE2 266 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 NOXRED1Q6NXP6 359 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 USP43Q70EL4 1123 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 SERPINA11Q86U17 422 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 GALNT13Q8IUC8 556 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 NLGN4XQ8N0W4 816 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 ZNF675Q8TD23 568 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 GGHQ92820 318 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 FEVQ99581 238 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 SLC32A1Q9H598 525 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 WDR70Q9NW82 654 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 SPATA7Q9P0W8 599 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 SNX6Q9UNH7 406 aa16.91■□□□□ 0.3
TRAM1-201ENST00000262213 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 ISPDA4D126 451 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 ABCB1P08183 1280 aaPredicted RBP16.9■□□□□ 0.3
TRAM1-201ENST00000262213 POU2F1P14859 743 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 ACRV1P26436 265 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 BMPR1AP36894 532 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 DGKEP52429 567 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 MTA1Q13330 715 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 C5orf22Q49AR2 442 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
TRAM1-201ENST00000262213 EIF3MQ7L2H7 374 aaKnown RBP16.9■□□□□ 0.3
TRAM1-201ENST00000262213 STX19Q8N4C7 294 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 DNAJB8Q8NHS0 232 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 SLC29A3Q9BZD2 475 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 RLIMQ9NVW2 624 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 SLC22A14Q9Y267 594 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 LINC00854A0A1B0GVQ3 168 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 YY2O15391 372 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 TBL1XO60907 577 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 CCNKO75909 580 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 STC2O76061 302 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 PTHP01270 115 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 BPIP17213 487 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 TUBA1BP68363 451 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 TTLL9Q3SXZ7 439 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 INO80DQ53TQ3 878 aaPredicted RBP16.9■□□□□ 0.3
TRAM1-201ENST00000262213 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 RGMBQ6NW40 437 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 TUBA1AQ71U36 451 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 GDPD3Q7L5L3 318 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 TSPAN33Q86UF1 283 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 PIH1D2Q8WWB5 315 aa16.9■□□□□ 0.3
TRAM1-201ENST00000262213 ZNF486Q96H40 463 aaPredicted RBP16.9■□□□□ 0.3
TRAM1-201ENST00000262213 SAGE2PA6NJ88 616 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 RPLP0P05388 317 aaKnown RBP16.89■□□□□ 0.3
TRAM1-201ENST00000262213 OR1E2P47887 323 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 ITGA1P56199 1179 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 UGT8Q16880 541 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 PTCHD3Q3KNS1 767 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 ARMCX4Q5H9R4 360 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 FAHD1Q6P587 224 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 NEK10Q6ZWH5 1172 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 CBLL1Q75N03 491 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms