RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 GSAPA4D1B5 854 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 ISM1B1AKI9 464 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 EPB42P16452 691 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 OCRLQ01968 901 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 CSRP2Q16527 193 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 CATSPEREQ5SY80 951 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 ZNF781Q8N8C0 355 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 CCDC74AQ96AQ1 378 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 RAB11FIP5Q9BXF6 653 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 MID1IP1Q9NPA3 183 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 PNPOQ9NVS9 261 aa26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 RP1P56715 2156 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 KLF11O14901 512 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 NRP2O60462 931 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 H2AFYO75367 372 aaKnown RBP26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 KITP10721 976 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 CDC16Q13042 620 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 PERM1Q5SV97 790 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 OR2A1Q8NGT9 310 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 SETD7Q8WTS6 366 aaKnown RBP26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 ZFPM2Q8WW38 1151 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 ATP6V1E2Q96A05 226 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 TXLNGQ9NUQ3 528 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 FGFR1OP2Q9NVK5 253 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 CUEDC1Q9NWM3 386 aaPredicted RBP26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 HRASLS2Q9NWW9 162 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 OR6C2Q9NZP2 312 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 ZDHHC2Q9UIJ5 367 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 ZFHX2Q9C0A1 2572 aaPredicted RBP26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 TMEM114B3SHH9 223 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 PRICKLE3O43900 615 aaPredicted RBP26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 UBXN7O94888 489 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 HSD17B2P37059 387 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 FOXA1P55317 472 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 ERVPABLB-1P60509 514 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 LCP2Q13094 533 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 TRAF3Q13114 568 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 NR0B2Q15466 257 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 LETMD1Q6P1Q0 360 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 RGS9BPQ6ZS82 235 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 CUZD1Q86UP6 607 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 KLHDC8AQ8IYD2 350 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 HMGCLL1Q8TB92 370 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 RAB3IL1Q8TBN0 382 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 THAP1Q9NVV9 213 aa26.49■■□□□ 1.83
SMARCD3-201ENST00000262188 PIPSLA2A3N6 862 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 PFDN1O60925 122 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 OR4F21O95013 312 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 GLB1P16278 677 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 VARSP26640 1264 aaKnown RBP26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 PIK3CGP48736 1102 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 AASDHQ4L235 1098 aaPredicted RBP26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 CLEC6AQ6EIG7 209 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 ELAC2Q9BQ52 826 aaKnown RBP26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 KLHL25Q9H0H3 589 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 RNF11Q9Y3C5 154 aa26.48■■□□□ 1.83
SMARCD3-201ENST00000262188 C4orf47A7E2U8 309 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 NUDT21O43809 227 aaKnown RBP26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 KDM1AO60341 852 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 CDH1P12830 882 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 CD59P13987 128 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 MEF2AQ02078 507 aaPredicted RBP26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 AMZ1Q400G9 498 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 ASCL5Q7RTU5 278 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 TMPRSS11BQ86T26 416 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 OR4F6Q8NGB9 312 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 FLVCR1-AS1Q8TAF5 88 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 NR1H4Q96RI1 486 aaPredicted RBP26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 TMEM9BQ9NQ34 198 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 KCNK4Q9NYG8 393 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 B4GAT1O43505 415 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 PEX11AO75192 247 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 ZNF883P0CG24 379 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 AMD1P17707 334 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 SERPINB3P29508 390 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 PROX2Q3B8N5 592 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 TCHHL1Q5QJ38 904 aaPredicted RBP26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 ACTR10Q9NZ32 417 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 STOML1Q9UBI4 398 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 ARL2BPQ9Y2Y0 163 aa26.47■■□□□ 1.83
SMARCD3-201ENST00000262188 ZNF839A8K0R7 811 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 SH3BP5O60239 455 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 CD22P20273 847 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 SF1Q15637 639 aaKnown RBP26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 FAM181AQ8N9Y4 354 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 RHBDD1Q8TEB9 315 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 OR2A14Q96R47 310 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 KCNH6Q9H252 994 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 SPNS1Q9H2V7 528 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 TIMM22Q9Y584 194 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 OR5K3A6NET4 321 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 LILRA5A6NI73 299 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 PROS1P07225 676 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 UGT2B7P16662 529 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 LSSP48449 732 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 CBX3Q13185 183 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 CHIT1Q13231 466 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 MAP7Q14244 749 aa26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 SUZ12Q15022 739 aaKnown RBP26.46■■□□□ 1.83
SMARCD3-201ENST00000262188 FOXB2Q5VYV0 432 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms