RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KIAA1191Q96A73 305 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
SGCA-201ENST00000262018 SLC38A3Q99624 504 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 SLC30A3Q99726 388 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 TMEM120AQ9BXJ8 343 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 HAO1Q9UJM8 370 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
SGCA-201ENST00000262018 PRSS21Q9Y6M0 314 aa12.87□□□□□ -0.35
SGCA-201ENST00000262018 PCNX1Q96RV3 2341 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 CFAP73A6NFT4 308 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 A8MT66 165 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 IPO13O94829 963 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 SNUPNO95149 360 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 CBX6O95503 412 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 HSPA4LO95757 839 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 TSPAN12O95859 305 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 TRIM23P36406 574 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 SERPINB5P36952 375 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 NSG1P42857 185 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 GPR1P46091 355 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 KCNC1P48547 511 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 NAGLUP54802 743 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 IL2P60568 153 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 CTBSQ01459 385 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 FOXM1Q08050 763 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 SETDB1Q15047 1291 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 PTRHD1Q6GMV3 140 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 RAET1GQ6H3X3 334 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 NCSTNQ92542 709 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 INPP5DQ92835 1189 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 POM121Q96HA1 1249 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 ATOH8Q96SQ7 321 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 RIOK2Q9BVS4 552 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 LATS2Q9NRM7 1088 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 TRNAU1APQ9NX07 287 aaKnown RBP12.86□□□□□ -0.35
SGCA-201ENST00000262018 TMPRSS11EQ9UL52 423 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 ZNF451Q9Y4E5 1061 aa12.86□□□□□ -0.35
SGCA-201ENST00000262018 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 A0A0G2JND7 137 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 IQCF5A8MTL0 148 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 DPM1O60762 260 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 KERAO60938 352 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 SMIM24O75264 130 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 FUCA1P04066 466 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 ALOX15P16050 662 aaPredicted RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 ACTN3Q08043 901 aaPredicted RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 OR4D1Q15615 310 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 WDR74Q6RFH5 385 aaPredicted RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 PELI3Q8N2H9 469 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 FITM2Q8N6M3 262 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 STAG3L4Q8TBR4 150 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 L3HYPDHQ96EM0 354 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 CNDP1Q96KN2 507 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 COPS8Q99627 209 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 TEX101Q9BY14 249 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 RUBCNLQ9H714 662 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 ACSS2Q9NR19 701 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 KLHL42Q9P2K6 505 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 SUFUQ9UMX1 484 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.85□□□□□ -0.35
SGCA-201ENST00000262018 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 ST14Q9Y5Y6 855 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 CCDC168Q8NDH2 2452 aa12.85□□□□□ -0.35
SGCA-201ENST00000262018 PIKFYVEQ9Y2I7 2098 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 ANKUB1A6NFN9 424 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 ARGFXA6NJG6 315 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 H0YHG0 523 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 SLC25A14O95258 325 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 RECKO95980 971 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 SOD1P00441 154 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 CEACAM5P06731 702 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 KITP10721 976 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 MYCLP1P12525 358 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 MTHFD2P13995 350 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 IMPDH1P20839 514 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 ACTR1BP42025 376 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 MAPK9P45984 424 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 HK2P52789 917 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 ACTR1AP61163 376 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 SLC6A19Q695T7 634 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 CPNE9Q8IYJ1 553 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 LKAAEAR1Q8TD35 194 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms