RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CXCR2P25025 360 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 GABRA4P48169 554 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 ABHD18Q0P651 414 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 MANEAQ5SRI9 462 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 DTX1Q86Y01 620 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 KLHDC8AQ8IYD2 350 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 SLC5A11Q8WWX8 675 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 DPH2Q9BQC3 489 aaPredicted RBP17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 MRPL57Q9BQC6 102 aaKnown RBP17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 DNAJC11Q9NVH1 559 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 GPRC5BQ9NZH0 403 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 DCDC2Q9UHG0 476 aa17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 PTBP2Q9UKA9 531 aaKnown RBP17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 TNPO3Q9Y5L0 923 aaKnown RBP17.97■□□□□ 0.47
CYSTM1-201ENST00000261811 A0A087WV48 116 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 UBXN8O00124 270 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 ZNF749O43361 778 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CCNT2O60583 730 aaKnown RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CTSVO60911 334 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 NTRK1P04629 796 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CDH1P12830 882 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 AGXTP21549 392 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 GMPRP36959 345 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 SLC6A12P48065 614 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 ALDH18A1P54886 795 aaKnown RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 VSX2P58304 361 aaPredicted RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CDC16Q13042 620 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CROCCP2Q86T23 111 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 ZSCAN1Q8NBB4 408 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 GALNT6Q8NCL4 622 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 ABHD11Q8NFV4 315 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 EPS8L3Q8TE67 593 aaKnown RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 NKD1Q969G9 470 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 LRFN5Q96NI6 719 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 C17orf62Q9BQA9 187 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 AIF1LQ9BQI0 150 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CD244Q9BZW8 370 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 SPRY4Q9C004 299 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 SPRTNQ9H040 489 aaPredicted RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 MRPL46Q9H2W6 279 aaKnown RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 PELI2Q9HAT8 420 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CUEDC1Q9NWM3 386 aaPredicted RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 CPSF2Q9P2I0 782 aaKnown RBP17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 OPTCQ9UBM4 332 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 ANGPTL3Q9Y5C1 460 aa17.96■□□□□ 0.46
CYSTM1-201ENST00000261811 IGKV1-8A0A0C4DH67 115 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 CCDC151A5D8V7 595 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 TAF4O00268 1085 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 MAP2K7O14733 419 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 EIF2S1P05198 315 aaKnown RBP17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PYGBP11216 843 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 ZNF28P17035 718 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 TAC1P20366 129 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 KCNC1P48547 511 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 CCT5P48643 541 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 HSPA7P48741 367 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 YBX1P67809 324 aaKnown RBP17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 CLN3Q13286 438 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PDK4Q16654 411 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PFKFB4Q16877 469 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 TECRLQ5HYJ1 363 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 WASHC2DQ5SRD0 308 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 METTL2BQ6P1Q9 378 aaKnown RBP17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 FBXO42Q6P3S6 717 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 LRRC70Q7Z2Q7 622 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 SPACA3Q8IXA5 215 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PLD6Q8N2A8 252 aaKnown RBP17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 SNX31Q8N9S9 440 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PROKR1Q8TCW9 393 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 NEIL2Q969S2 332 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 GPR78Q96P69 363 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 OR4K3Q96R72 315 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 CCNL2Q96S94 520 aaPredicted RBP17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 FAM117AQ9C073 453 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 PLAAQ9Y263 795 aa17.95■□□□□ 0.46
CYSTM1-201ENST00000261811 KCNE1BA0A087WTH5 132 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 SRRM3A6NNA2 597 aaPredicted RBP17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 H0YGG7 62 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 HAT1O14929 419 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 TAPBPO15533 448 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 GLRA3O75311 464 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 TIAF1O95411 115 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 CD63P08962 238 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 PIM1P11309 404 aaPredicted RBP17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 PIK3CGP48736 1102 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 ARF3P61204 181 aaPredicted RBP17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 CSNK1G2P78368 415 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 NAA30Q147X3 362 aaPredicted RBP17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 ZXDCQ2QGD7 858 aaPredicted RBP17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 RHBDD2Q6NTF9 364 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 NXPE4Q6UWF7 544 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 TMPRSS11BQ86T26 416 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 KRT78Q8N1N4 520 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 UBTD2Q8WUN7 234 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 LHX9Q9NQ69 397 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 XPR1Q9UBH6 696 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 KCND3Q9UK17 655 aa17.94■□□□□ 0.46
CYSTM1-201ENST00000261811 CCDC88CQ9P219 2028 aa17.93■□□□□ 0.46
CYSTM1-201ENST00000261811 TRBC2A0A5B9 178 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms