RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 AGAP6Q5VW22 663 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 GPRIN1Q7Z2K8 1008 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 ZNF431Q8TF32 576 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-201ENST00000261646 JPH3Q8WXH2 748 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-201ENST00000261646 AGAP4Q96P64 663 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 ZSCAN5AQ9BUG6 496 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 RBM38Q9H0Z9 239 aaKnown RBP15.77■□□□□ 0.12
SREBF1-201ENST00000261646 TAS2R7Q9NYW3 318 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 RIMKLBQ9ULI2 386 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 DDX60LQ5H9U9 1706 aaKnown RBP15.77■□□□□ 0.11
SREBF1-201ENST00000261646 STRCP1A6NGW2 1772 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 GSAPA4D1B5 854 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 TLR4O00206 839 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 PRSS56P0CW18 603 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 AKR1A1P14550 325 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 DUSP4Q13115 394 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 PLD1Q13393 1074 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 FAM217AQ8IXS0 508 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 AQP11Q8NBQ7 271 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 UFD1Q92890 307 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 MSANTD3Q96H12 275 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 IL12RB2Q99665 862 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 BCL7BQ9BQE9 202 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 SMURF1Q9HCE7 757 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 MAN2B2Q9Y2E5 1009 aa15.77■□□□□ 0.11
SREBF1-201ENST00000261646 TLL1O43897 1013 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 OR5F1O95221 314 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 HAPLN1P10915 354 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CCL14Q16627 93 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 ZNF648Q5T619 568 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 SPATC1Q76KD6 591 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 PAPD5Q8NDF8 572 aaKnown RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 IMP4Q96G21 291 aaKnown RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 FCRL4Q96PJ5 515 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 NFKBIL1Q9UBC1 381 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 RHCGQ9UBD6 479 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CMAHPQ9Y471 501 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 GPR45Q9Y5Y3 372 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 BCORQ6W2J9 1755 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 GUCY1B2O75343 617 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 KLHL18O94889 574 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CRYZL1O95825 349 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CA5AP35218 305 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 UGT8Q16880 541 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 TNFAIP8L2Q6P589 184 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 FAM92BQ6ZTR7 304 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CADM2Q8N3J6 435 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 SLCO4A1Q96BD0 722 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 TTPALQ9BTX7 342 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 OR51E2Q9H255 320 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 OSGEPL1Q9H4B0 414 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 IL1RAPQ9NPH3 570 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 ZFP37Q9Y6Q3 630 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 DDX60Q8IY21 1712 aaKnown RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 INMT-MINDY4F8WBC2 141 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 PIRO00625 290 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 AP3D1O14617 1153 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 SEC14L2O76054 403 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 BMP7P18075 431 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 GRSF1Q12849 480 aaKnown RBP eCLIP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 NFE2L1Q14494 772 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 OXA1LQ15070 435 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 VMACQ2NL98 169 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 POM121L1PQ3SYA9 428 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 WDR45BQ5MNZ6 344 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 OR5AK3PQ8NH89 298 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 FEVQ99581 238 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 FAM83DQ9H4H8 585 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 MEIS3P2A8K0S8 358 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 ISM1B1AKI9 464 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 BCKDHAP12694 445 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 MAPKAPK2P49137 400 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 EMP3P54852 163 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 SMAD3P84022 425 aaKnown RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 HSF2Q03933 536 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 SOX4Q06945 474 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 ZSWIM9Q86XI8 627 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 BPIFB1Q8TDL5 484 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 MAGEB10Q96LZ2 347 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 DPH2Q9BQC3 489 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 NEURL2Q9BR09 285 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 GSDMCQ9BYG8 508 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
SREBF1-201ENST00000261646 WDR6Q9NNW5 1121 aaKnown RBP15.76■□□□□ 0.11
SREBF1-201ENST00000261646 ARL5CA6NH57 179 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 UPK3BL1B0FP48 263 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 UPK3BL2E5RIL1 263 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 ATF6P18850 670 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 FDXRP22570 491 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 XKP51811 444 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 SCARB2Q14108 478 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 AKIRIN2Q53H80 203 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 ATXN7L2Q5T6C5 722 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-201ENST00000261646 KLHL31Q9H511 634 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 GLI3P10071 1580 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 MYO9BQ13459 2157 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 A0A096LPI6 279 aa15.75■□□□□ 0.11
SREBF1-201ENST00000261646 HAS3O00219 553 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms