RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RASSF6Q6ZTQ3 369 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SLFN12Q8IYM2 578 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 FAM83FQ8NEG4 500 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 BOD1Q96IK1 185 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 FAM118BQ9BPY3 351 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 KCNS3Q9BQ31 491 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SOHLH2Q9NX45 425 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 AASSQ9UDR5 926 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MOKQ9UQ07 419 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 KDM3BQ7LBC6 1761 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 A0A0B4J293 547 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 URADA6NGE7 173 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 TRIM49D1C9J1S8 452 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 E7ENX8 843 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PIK3R2O00459 728 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MED7O43513 233 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CYTIPO60759 359 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MMP3P08254 477 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MMP10P09238 476 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MC3RP41968 323 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 RPS5P46782 204 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SLC18A1P54219 525 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SNRPEP62304 92 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 OR8G1Q15617 311 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM67Q5HYA8 995 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF468Q5VIY5 522 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 FBXO42Q6P3S6 717 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NAPRTQ6XQN6 538 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ZBTB49Q6ZSB9 765 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 VSIG10LQ86VR7 867 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 UNC5BQ8IZJ1 945 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SELENOHQ8IZQ5 122 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NLGN4XQ8N0W4 816 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 LILRA2Q8N149 483 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 OR52N2Q8NGI0 321 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 STOML3Q8TAV4 291 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PCNPQ8WW12 178 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 WBP1Q96G27 269 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PEX11GQ96HA9 241 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 RNF145Q96MT1 663 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 C1QTNF6Q9BXI9 259 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PPIL3Q9H2H8 161 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 IKZF4Q9H2S9 585 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SEC14L4Q9UDX3 406 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 LGALS13Q9UHV8 139 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 KLHL21Q9UJP4 597 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NCKAP1Q9Y2A7 1128 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 BACE2Q9Y5Z0 518 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CDY2AQ9Y6F7 541 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PIK3C2AO00443 1686 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ATRNO75882 1429 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PLSCR5A0PG75 271 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 HMX2A2RU54 273 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 C5orf51A6NDU8 294 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 M0R3G1 203 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 STX16O14662 325 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PGRMC2O15173 223 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 OIP5O43482 229 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SSX4O60224 188 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SELENOFO60613 162 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SDC3O75056 442 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF821O75541 412 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 IFNA7P01567 189 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ALPLP05186 524 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ADH1AP07327 375 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PSAPP07602 524 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CD44P16070 742 aaKnown RBP7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PAX6P26367 422 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MAPK1P28482 360 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SDHAP31040 664 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PTGFRP43088 359 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 NDUFV1P49821 464 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ARL4CP56559 192 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ARF5P84085 180 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 GAGE1Q13065 139 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MAP2K5Q13163 448 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MFSD10Q14728 455 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MED22Q15528 200 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MICBQ29980 383 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PLA1AQ53H76 456 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF311Q5JNZ3 666 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 FAM46CQ5VWP2 391 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CERS6Q6ZMG9 384 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 CYFIP1Q7L576 1253 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 S100A7AQ86SG5 101 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 PAQR7Q86WK9 346 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 STX19Q8N4C7 294 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SPATA6LQ8N4H0 392 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 SETD9Q8NE22 299 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 OIT3Q8WWZ8 545 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MYLPFQ96A32 169 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 GPR137Q96N19 417 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MFFQ9GZY8 342 aa7.53□□□□□ -1.2
GPNMB-201ENST00000258733 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms