RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KCTD13Q8WZ19 329 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PSAT1Q9Y617 370 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TLX3O43711 291 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 HOXD13P35453 343 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 ARHGAP40Q5TG30 622 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 HSDL2Q6YN16 418 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 KLRF1Q9NZS2 232 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF221Q9UK13 617 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TELO2Q9Y4R8 837 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TLL2Q9Y6L7 1015 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TRBC2A0A5B9 178 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 M0R2N6 131 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 ACSL1P33121 698 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 GJD3Q8N144 294 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF676Q8N7Q3 588 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TMBIM1Q969X1 311 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 BARD1Q99728 777 aaKnown RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 HERC2P3Q9BVR0 1158 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 P2RX2Q9UBL9 471 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 EFCAB9A8MZ26 197 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 MPZL2O60487 215 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 PGAM2P15259 253 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 POLR2CP19387 275 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 CCNOP22674 350 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 GHRHRQ02643 423 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 TIGD6Q17RP2 521 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 SH3YL1Q96HL8 342 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 MAN2B2Q9Y2E5 1009 aa18.19■□□□□ 0.5
SMARCC1-201ENST00000254480 LOC100509620A0A075B734 347 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 EDDM13A0A1B0GTR0 161 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM159BA6NKW6 160 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF726A6NNF4 738 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 SLC3A1Q07837 685 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 Q6ZVL8 140 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 GALNT10Q86SR1 603 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 PLA2G15Q8NCC3 412 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF514Q96K75 400 aaPredicted RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 MYOM1P52179 1685 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 BEST1O76090 585 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 MAPK14Q16539 360 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 BRAT1Q6PJG6 821 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 OVCA2Q8WZ82 227 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 SCAMP4Q969E2 229 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF599Q96NL3 588 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 CGREF1Q99674 301 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 RAB11FIP5Q9BXF6 653 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 FBRSL1Q9HCM7 1045 aaKnown RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 SPATA7Q9P0W8 599 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 RPLP0P05388 317 aaKnown RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 CDH1P12830 882 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 RABL3Q5HYI8 236 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 OXR1Q8N573 874 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF347Q96SE7 839 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 CST11Q9H112 138 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 FAM124BQ9H5Z6 455 aaPredicted RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 C6orf47O95873 294 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 CSTF2P33240 577 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 DNASE1L3Q13609 305 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 GPRC6AQ5T6X5 926 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF615Q8N8J6 731 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 PRICKLE1Q96MT3 831 aaPredicted RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 B4GALT6Q9UBX8 382 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF99A8MXY4 864 aaPredicted RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 KDELR3O43731 214 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 PAK4O96013 591 aaPredicted RBP18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 PSKH1P11801 424 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 PAAF1Q9BRP4 392 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 NDC1Q9BTX1 674 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 UCKL1Q9NWZ5 548 aa18.18■□□□□ 0.5
SMARCC1-201ENST00000254480 C2orf92A0A1B0GVN3 265 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 BLOC1S5-TXNDC5H3BN57 136 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SEMA3DO95025 777 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 CD36P16671 472 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ARL9Q6T311 187 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SIAH1Q8IUQ4 282 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 GATSQ8NAP1 163 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 OR4K1Q8NGD4 311 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 RAB8BQ92930 207 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 SLC22A18Q96BI1 424 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 MERTKQ12866 999 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 CMTM7Q96FZ5 175 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 EURLQ9NYK6 297 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 MANBAO00462 879 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 COCHO43405 550 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ADNP2Q6IQ32 1131 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 CMTR2Q8IYT2 770 aaKnown RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PLD6Q8N2A8 252 aaKnown RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 OR8H1Q8NGG4 311 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PHOSPHO1Q8TCT1 267 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 M0QX08 132 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 CYB5AP00167 134 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PDX1P52945 283 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 ADAM8P78325 824 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 MLLT1Q03111 559 aaPredicted RBP18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 DLG1Q12959 904 aa18.17■□□□□ 0.5
SMARCC1-201ENST00000254480 PRRT3Q5FWE3 981 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms