RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 DET1Q7L5Y6 550 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 TAS2R42Q7RTR8 314 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ADIPOR2Q86V24 386 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 KRTCAP2Q8N6L1 136 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CELF5Q8N6W0 485 aaKnown RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ITCHQ96J02 903 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CLMPQ9H6B4 373 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 KAT8Q9H7Z6 458 aaKnown RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ZFP14Q9HCL3 533 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PCDH12Q9NPG4 1184 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 VNN3Q9NY84 501 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 GPC6Q9Y625 555 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 FFAR3O14843 346 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 GPR42O15529 346 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 FFAR2O15552 330 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 RECQL5O94762 991 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 VBP1P61758 197 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 HYAL1Q12794 435 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 DNASE1L3Q13609 305 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 NPTX1Q15818 432 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 GALNT5Q7Z7M9 940 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 DYNC2LI1Q8TCX1 351 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 NETO1Q8TDF5 533 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PHF10Q8WUB8 498 aaKnown RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 MYO19Q96H55 970 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PDLIM5Q96HC4 596 aaKnown RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ZNF300Q96RE9 604 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ADGRE3Q9BY15 652 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CIPCQ9C0C6 399 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 DHRS7Q9Y394 339 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 TPRKBQ9Y3C4 175 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ANTXRLA6NF34 631 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 RAD51BO15315 384 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CD6P30203 668 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 HMGCS1Q01581 520 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 BCL2L1Q07817 233 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SMU1Q2TAY7 513 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CACHD1Q5VU97 1274 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SHQ1Q6PI26 577 aaKnown RBP16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CCDC81Q6ZN84 652 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 PLEKHG7Q6ZR37 379 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CALHM3Q86XJ0 350 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SFTPA1Q8IWL2 248 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 PLPP6Q8IY26 295 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CHST14Q8NCH0 376 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 EID2BQ96D98 161 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 FAM120BQ96EK7 910 aaKnown RBP16.47■□□□□ 0.23
FOXA1-201ENST00000250448 CPPED1Q9BRF8 314 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-201ENST00000250448 BTBD2Q9BX70 525 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 ALOXE3Q9BYJ1 711 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 P2RY12Q9H244 342 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 RIBC2Q9H4K1 309 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
FOXA1-201ENST00000250448 ZDHHC6Q9H6R6 413 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 C1orf109Q9NX04 203 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 PCDHB14Q9Y5E9 798 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SLC28A1O00337 649 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 JUNDP17535 347 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 IL1RNP18510 177 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 PSMB9P28065 219 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 GRK3P35626 688 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 MASP1P48740 699 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SLC35A2P78381 396 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 HIST2H2ACQ16777 129 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-201ENST00000250448 INAVAQ3KP66 663 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 ARMC12Q5T9G4 340 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 C22orf39Q6P5X5 142 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 HPS1Q92902 700 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 ASB16Q96NS5 453 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 OR52E6Q96RD3 313 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 GABARAPL1Q9H0R8 117 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 DUSP21Q9H596 190 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 TMED5Q9Y3A6 229 aa16.47■□□□□ 0.23
FOXA1-201ENST00000250448 HOXB6P17509 224 aaKnown RBP16.46■□□□□ 0.23
FOXA1-201ENST00000250448 RAB30Q15771 203 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 CCDC92Q53HC0 331 aaPredicted RBP16.46■□□□□ 0.23
FOXA1-201ENST00000250448 SYT6Q5T7P8 510 aaPredicted RBP16.46■□□□□ 0.23
FOXA1-201ENST00000250448 LAIR1Q6GTX8 287 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 SYCE2Q6PIF2 218 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 DPY19L3Q6ZPD9 716 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 SCAIQ8N9R8 606 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 OR2AP1Q8NGE2 309 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 PYURFQ96I23 114 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 ZDHHC4Q9NPG8 344 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 FARSBQ9NSD9 589 aaKnown RBP16.46■□□□□ 0.23
FOXA1-201ENST00000250448 SACM1LQ9NTJ5 587 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 ELOVL2Q9NXB9 296 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 KLQ9UEF7 1012 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 TAPBPO15533 448 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 FZD6O60353 706 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 PGLSO95336 258 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 GUCA1CO95843 209 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 IGSF6O95976 241 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 MT-ND2P03891 347 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 CYP4B1P13584 511 aa16.46■□□□□ 0.23
FOXA1-201ENST00000250448 GNPDA1P46926 289 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms