RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 DCTN4Q9UJW0 460 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 PRAMEF33A0A0G2JMD5 474 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 GOLGA8QA0A0J9YX86 632 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 GOLGA8OA6NCC3 632 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 GOLGA8NF8WBI6 632 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 MANBAO00462 879 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 BTN3A3O00478 584 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 PRAMEF4O60810 478 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 CCDC22O60826 627 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 ACPPP15309 386 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 PRPH2P23942 346 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 DUSP3P51452 185 aaPredicted RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 FOXA1P55317 472 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 PHEXP78562 749 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 BTKQ06187 659 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 TCF15Q12870 199 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 NR0B2Q15466 257 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 TCEA2Q15560 299 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 SF1Q15637 639 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 PRAMEF9Q5VWM5 478 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 ZNF425Q6IV72 752 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 OGFOD2Q6N063 350 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 ARMC6Q6NXE6 501 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 MAVSQ7Z434 540 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 SLC35F3Q8IY50 421 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 RFWD2Q8NHY2 731 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 FLVCR1-AS1Q8TAF5 88 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 WDR20Q8TBZ3 569 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 AGR3Q8TD06 166 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 PPP3R2Q96LZ3 170 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 OR2A14Q96R47 310 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 DPYSL5Q9BPU6 564 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 SHCBP1LQ9BZQ2 653 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 TMEM45AQ9NWC5 275 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 ACTR10Q9NZ32 417 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 CIDEBQ9UHD4 219 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 POMT2Q9UKY4 750 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 PADI4Q9UM07 663 aa12.45□□□□□ -0.42
LSM8-201ENST00000249299 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
LSM8-201ENST00000249299 FANCMQ8IYD8 2048 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 TRBC2A0A5B9 178 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 EME2A4GXA9 379 aaPredicted RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 ISM1B1AKI9 464 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 SDHDO14521 159 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 PIP5K1BO14986 540 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 SLC22A2O15244 555 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 RGS14O43566 566 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 DIAPH2O60879 1101 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 PROS1P07225 676 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 CDH1P12830 882 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 UGT2B7P16662 529 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 AMD1P17707 334 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 CD22P20273 847 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 PEBP1P30086 187 aaKnown RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 AHRP35869 848 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 NBL1P41271 181 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 GRK6P43250 576 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 CAPZBP47756 277 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 ARFIP1P53367 373 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 REEP5Q00765 189 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 MAD2L1Q13257 205 aaPredicted RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 TSTA3Q13630 321 aaPredicted RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 PDCD2Q16342 344 aaPredicted RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 LPAL2Q16609 132 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.423e-12■■■■□ 24
LSM8-201ENST00000249299 SPESP1Q6UW49 350 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 TMIGD1Q6UXZ0 262 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 LARP4Q71RC2 724 aaKnown RBP eCLIP12.44□□□□□ -0.425e-9■□□□□ 8.7
LSM8-201ENST00000249299 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 MINDY1Q8N5J2 469 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 KYQ8NBH2 561 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 OR7G3Q8NG95 312 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 OR10G6Q8NH81 332 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 SELENOMQ8WWX9 145 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 WNT2BQ93097 391 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 ZDHHC12Q96GR4 267 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
LSM8-201ENST00000249299 TUBB1Q9H4B7 451 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 C1GALT1Q9NS00 363 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 SPHK1Q9NYA1 384 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 TMED5Q9Y3A6 229 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 TIMM22Q9Y584 194 aa12.44□□□□□ -0.42
LSM8-201ENST00000249299 A0A0J9YY10 115 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 OR2A25A4D2G3 310 aa12.43□□□□□ -0.42
LSM8-201ENST00000249299 TMEM233B4DJY2 109 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms