RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TPD52P55327 224 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 ISL1P61371 349 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 RAE1P78406 368 aaKnown RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF33BQ06732 778 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 TMEM115Q12893 351 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 LAPTM4AQ15012 233 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 VMACQ2NL98 169 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 ARHGAP15Q53QZ3 475 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 GRHL2Q6ISB3 625 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 LIPIQ6XZB0 460 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 PTOV1Q86YD1 416 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 ARL10Q8N8L6 244 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 MRPL43Q8N983 215 aaKnown RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF557Q8N988 423 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 GLMNQ92990 594 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 CCDC138Q96M89 665 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 VPS35Q96QK1 796 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 PKP4Q99569 1192 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 DPH2Q9BQC3 489 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 TBC1D14Q9P2M4 693 aa18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 RUVBL1Q9Y265 456 aaKnown RBP18.89■□□□□ 0.62
CDC42EP1-201ENST00000249014 TRIM64BA6NI03 449 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 H0YIV9 168 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 FOXD2O60548 495 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 PRMT3O60678 531 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 MITFO75030 526 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 ATG13O75143 517 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 EPN2O95208 641 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 CPSF4O95639 269 aaKnown RBP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 XPAP23025 273 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 MMP12P39900 470 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 NNMTP40261 264 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 MAPK10P53779 464 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 HTRA4P83105 476 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 PIGFQ07326 219 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 ACSM2AQ08AH3 577 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 GRSF1Q12849 480 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 LDLRAP1Q5SW96 308 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 ACSM2BQ68CK6 577 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 CEP68Q76N32 757 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 HIPK1Q86Z02 1210 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 SPARTQ8N0X7 666 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 AP2M1Q96CW1 435 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 SGK2Q9HBY8 427 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 EXD2Q9NVH0 621 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 CHD7Q9P2D1 2997 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 GULP1Q9UBP9 304 aa18.89■□□□□ 0.61
CDC42EP1-201ENST00000249014 PCM1Q15154 2024 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 SEC14L2O76054 403 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 ELFN1P0C7U0 828 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 CD247P20963 164 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 PBLDP30039 288 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 SKIV2LQ15477 1246 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 ZNF691Q5VV52 312 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 SHQ1Q6PI26 577 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 CYP4Z1Q86W10 505 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 ATL1Q8WXF7 558 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 SNX19Q92543 992 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 SH3KBP1Q96B97 665 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 CNDP2Q96KP4 475 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 CCM2Q9BSQ5 444 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 LHPPQ9H008 270 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 IL1RAPQ9NPH3 570 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 FAM120CQ9NX05 1096 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 QSOX1O00391 747 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 CATP04040 527 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 HNF4AP41235 474 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 METAP1P53582 386 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 ACOX1Q15067 660 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 TMEM220Q6QAJ8 160 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 PARS2Q7L3T8 475 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 VTCN1Q7Z7D3 282 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 C1orf52Q8N6N3 182 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 OR56A3Q8NH54 315 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 POP5Q969H6 163 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 PAWRQ96IZ0 340 aaKnown RBP18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 RAD18Q9NS91 495 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
CDC42EP1-201ENST00000249014 GABRR3A8MPY1 467 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 DIRAS1O95057 198 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 FGF19O95750 216 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 SEMG1P04279 462 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 HOXB6P17509 224 aaKnown RBP18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 ENTPD1P49961 510 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 C21orf58P58505 322 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 GTF2H3Q13889 308 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 GALNT5Q7Z7M9 940 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 KLHDC8AQ8IYD2 350 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 PGBD3Q8N328 593 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 TERB1Q8NA31 727 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 ING5Q8WYH8 240 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 SAMD11Q96NU1 681 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 WRAP53Q9BUR4 548 aaKnown RBP18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 DKK3Q9UBP4 350 aa18.87■□□□□ 0.61
CDC42EP1-201ENST00000249014 hCG_2039718K7EN88 272 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 SLC16A6O15403 523 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 GSTM2P28161 218 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 KDELR2P33947 212 aa18.86■□□□□ 0.61
CDC42EP1-201ENST00000249014 VLDLRP98155 873 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms