RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 HYKKA2RU49 373 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 H0YGG7 62 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 H7BY64 318 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 PHGDHO43175 533 aaKnown RBP23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 FAM155BO75949 473 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 ONECUT2O95948 504 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 SFTPCP11686 197 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 NPPBP16860 134 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 GRK3P35626 688 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 CCR10P46092 362 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 ARF3P61204 181 aaPredicted RBP23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 C1orf189Q5VU69 101 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 RAPH1Q70E73 1250 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 OR4N4Q8N0Y3 316 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 THAP4Q8WY91 577 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 PRAP1Q96NZ9 151 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 RUFY1Q96T51 708 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 EGFL8Q99944 293 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 TCFL5Q9UL49 500 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 CDC14CA4D256 554 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 NRP2O60462 931 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 EIF2S1P05198 315 aaKnown RBP23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 CD1DP15813 335 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 SLC26A3P40879 764 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 RPS15AP62244 130 aaKnown RBP23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 EFTUD2Q15029 972 aaKnown RBP eCLIP23.26■■□□□ 1.317e-8■■■■■ 41.9
SDF2L1-201ENST00000248958 TSNQ15631 228 aaKnown RBP23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 MUM1Q2TAK8 710 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 NKAIN1Q4KMZ8 207 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 CDKL4Q5MAI5 379 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 MLIPQ5VWP3 458 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 PRMT9Q6P2P2 845 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 TCAIMQ8N3R3 496 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 UBXN10Q96LJ8 280 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 ADNPQ9H2P0 1102 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 STARD5Q9NSY2 213 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 NFU1Q9UMS0 254 aa23.26■■□□□ 1.31
SDF2L1-201ENST00000248958 KCNE1BA0A087WTH5 132 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 HAT1O14929 419 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 ACSL3O95573 720 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 ALBP02768 609 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 RHOXF2BP0C7M4 288 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 RPS18P62269 152 aaKnown RBP23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 CSNK1G2P78368 415 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 ZXDCQ2QGD7 858 aaPredicted RBP23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 PRTGQ2VWP7 1150 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 DEFB109BQ30KR1 87 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 GARNL3Q5VVW2 1013 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 TBC1D1Q86TI0 1168 aaPredicted RBP23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 CSNK1A1LQ8N752 337 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 APOBEC4Q8WW27 367 aaKnown RBP23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 FKBP10Q96AY3 582 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 PYCR2Q96C36 320 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 MVB12AQ96EY5 273 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 RHOXF2Q9BQY4 288 aa23.25■■□□□ 1.31
SDF2L1-201ENST00000248958 LOC400499M0QZD8 3231 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 CSHL1Q14406 222 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 TGFBIQ15582 683 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 UAP1Q16222 522 aaPredicted RBP23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 MRPL14Q6P1L8 145 aaKnown RBP23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 ABHD11Q8NFV4 315 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 KIAA1191Q96A73 305 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 NMRAL1Q9HBL8 299 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 CDC14AQ9UNH5 594 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 DYRK1BQ9Y463 629 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 IKBKGQ9Y6K9 419 aa23.24■■□□□ 1.31
SDF2L1-201ENST00000248958 A0A087WUV0 522 aaPredicted RBP23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 A0A087X1B8 175 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 INHBAP08476 426 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 SLC35E2BP0CK96 405 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 SERPINB9P50453 376 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 CCR8P51685 355 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 NDUFA9Q16795 377 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 ATP1A1-AS1Q5TC04 95 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 MROH9Q5TGP6 573 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 TRMT10CQ7L0Y3 403 aaKnown RBP23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 TAOK1Q7L7X3 1001 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 GPSM1Q86YR5 675 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 KLHDC8AQ8IYD2 350 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 TBC1D19Q8N5T2 526 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 EIF1ADQ8N9N8 165 aaKnown RBP23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 STAG3L4Q8TBR4 150 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 CABS1Q96KC9 395 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 SARGQ9BW04 601 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 TUBD1Q9UJT1 453 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 RUVBL1Q9Y265 456 aaKnown RBP23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 ACOT9Q9Y305 439 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 KCNE2Q9Y6J6 123 aa23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 SMG1Q96Q15 3661 aaKnown RBP23.23■■□□□ 1.31
SDF2L1-201ENST00000248958 CCDC189A1A4V9 331 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 PRPF4O43172 522 aaKnown RBP eCLIP23.22■■□□□ 1.313e-14■■■■□ 25.1
SDF2L1-201ENST00000248958 FURINP09958 794 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 LTA4HP09960 611 aaKnown RBP23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 CDH1P12830 882 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 FOLR3P41439 243 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 SSPNQ14714 243 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 OVCH1Q7RTY7 1134 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 CMC1Q7Z7K0 106 aa23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 THOC6Q86W42 341 aaKnown RBP23.22■■□□□ 1.31
SDF2L1-201ENST00000248958 RAB43Q86YS6 212 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms