RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 WDR37Q9Y2I8 494 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 HELZP42694 1942 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 GON4LQ3T8J9 2241 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 H3BM21 787 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 FPGTO14772 594 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 YY2O15391 372 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CISD3P0C7P0 127 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 LAMP1P11279 417 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 PFKLP17858 780 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CD97P48960 835 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 DMPKQ09013 629 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 FAM109BQ6ICB4 259 aaPredicted RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 METTL2BQ6P1Q9 378 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ABRAXAS1Q6UWZ7 409 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 PRR23BQ6ZRT6 265 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TMCO5AQ8N6Q1 288 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 FNDC8Q8TC99 324 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 SGCDQ92629 289 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 NEIL2Q969S2 332 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ARRDC3Q96B67 414 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 SH3GL1Q99961 368 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ACAT2Q9BWD1 397 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 KCNH6Q9H252 994 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 EPB41L1Q9H4G0 881 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 PLAGL1Q9UM63 463 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 NUMA1Q14980 2115 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TRBV5-3A0A0A0MS03 114 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 EIF3FO00303 357 aaPredicted RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 LZTS3O60299 673 aaPredicted RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 AQP1P29972 269 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 TPD52P55327 224 aaPredicted RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 DAG1Q14118 895 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 GGTA1PQ4G0N0 100 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 IER5LQ5T953 404 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 CLVS1Q8IUQ0 354 aaPredicted RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 SDCCAG3Q96C92 435 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ING2Q9H160 280 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ADNPQ9H2P0 1102 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 TOR3AQ9H497 397 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ARMC7Q9H6L4 198 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 GORASP2Q9H8Y8 452 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 A0A096LPI6 279 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 GNG14A0A1W2PPG7 69 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 H0Y858 1186 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ERN1O75460 977 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 IL7RP16871 459 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 PTPN6P29350 595 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 GPR1P46091 355 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 LDLRAP1Q5SW96 308 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ANGPTL8Q6UXH0 198 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ZBTB46Q86UZ6 589 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 MMAAQ8IVH4 418 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 THG1LQ9NWX6 298 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ASIC5Q9NY37 505 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM98Q9Y2Y6 226 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 PRUNE2Q8WUY3 3088 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 AXIN1O15169 862 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 SPINT1O43278 529 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 HS6ST1O60243 411 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 PSIP1O75475 530 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 THRBP10828 461 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ENGP17813 658 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 MAPK1P28482 360 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 POLR2IP36954 125 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 WASP42768 502 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 ENTPD1P49961 510 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 DCDC1P59894 354 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 PPIGQ13427 754 aaKnown RBP eCLIP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 CDKL4Q5MAI5 379 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 CCDC115Q96NT0 180 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 IL17FQ96PD4 163 aa15.24■□□□□ 0.03
LRFN1-201ENST00000248668 CFAP20Q9Y6A4 193 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 MTCL1Q9Y4B5 1905 aaKnown RBP15.24■□□□□ 0.03
LRFN1-201ENST00000248668 hCG_2039718K7EN88 272 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 FGF19O95750 216 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 ALPLP05186 524 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 PIGAP37287 484 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 PRLHRP49683 370 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 ALDH3A2P51648 485 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 RPS13P62277 151 aaKnown RBP15.23■□□□□ 0.03
LRFN1-201ENST00000248668 SMU1Q2TAY7 513 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 FAM180BQ6P0A1 224 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 PATL1Q86TB9 770 aaKnown RBP15.23■□□□□ 0.03
LRFN1-201ENST00000248668 CHCHD4Q8N4Q1 142 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 HUS1BQ8NHY5 278 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 GIPC3Q8TF64 312 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 FOPNLQ96NB1 174 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 SH3BP4Q9P0V3 963 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 CDC14AQ9UNH5 594 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 PCYT1BQ9Y5K3 369 aaPredicted RBP15.23■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM247A6NEH6 219 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 MYO1GB0I1T2 1018 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 TMX2-CTNND1H3BSU7 103 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 CLIC1O00299 241 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 SLC16A5O15375 505 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 AP2A2O94973 939 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 NFE2L1Q14494 772 aa15.23■□□□□ 0.03
LRFN1-201ENST00000248668 VTCN1Q7Z7D3 282 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms