RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 GIPC1O14908 333 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 IL12AP29459 219 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 NUDT1P36639 197 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 CLCN2P51788 898 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ERVK-8P63133 956 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 TXNL4AP83876 142 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 BNIP2Q12982 314 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 LCN8Q6JVE9 175 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ZBTB49Q6ZSB9 765 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ZNF514Q96K75 400 aaPredicted RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 TRIM15Q9C019 465 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 LATS2Q9NRM7 1088 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 NUDT4Q9NZJ9 180 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 SLAMF8Q9P0V8 285 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 CIDEBQ9UHD4 219 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 DHRS12A0PJE2 317 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ARPC2O15144 300 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 KMOO15229 486 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 CELA2BP08218 269 aaPredicted RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 HOXC4P09017 264 aaPredicted RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 KELP23276 732 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 POLR2JP52435 117 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ABRQ12979 859 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 C1orf61Q13536 156 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 NADK2Q4G0N4 442 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 PDCD4Q53EL6 469 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 PPP4R4Q6NUP7 873 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 MFSD2AQ8NA29 543 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 OR2L2Q8NH16 312 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 ASZ1Q8WWH4 475 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 NELL1Q92832 810 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 TMEM159Q96B96 161 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 PDLIM5Q96HC4 596 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 TRIM54Q9BYV2 358 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 NDUFA13Q9P0J0 144 aa16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 CFAP20Q9Y6A4 193 aaKnown RBP16.41■□□□□ 0.22
CDKN1A-201ENST00000244741 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 MGAT4DA6NG13 374 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 SAC3D1A6NKF1 404 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 PRR33A8MZF0 331 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 QSOX1O00391 747 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 EEDO75530 441 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 GSK3BP49841 420 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 HTR6P50406 440 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 APOFQ13790 326 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 SBSNQ6UWP8 590 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 IFNEQ86WN2 208 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 CARM1Q86X55 608 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 SFRP1Q8N474 314 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 FNDC5Q8NAU1 212 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 ZBTB44Q8NCP5 570 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 FAM126AQ9BYI3 521 aaPredicted RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 GRIP2Q9C0E4 1043 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 RIC8BQ9NVN3 520 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 FAM149AA5PLN7 773 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 PLOD2O00469 737 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 VILLO15195 856 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 MTHFD1P11586 935 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 DGKAP23743 735 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 CASP2P42575 452 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 AFF3P51826 1226 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 CTBSQ01459 385 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 LIPEQ05469 1076 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 ZNF658BQ4V348 819 aaPredicted RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 TIGD2Q4W5G0 525 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 GOLGA7Q7Z5G4 137 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 KIAA2013Q8IYS2 634 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 ADGRG5Q8IZF4 528 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 METTL6Q8TCB7 284 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 PROKR1Q8TCW9 393 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 DGCR14Q96DF8 476 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 TMEM74Q96NL1 305 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 OR2M4Q96R27 311 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 PFDN4Q9NQP4 134 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 COMMD3-BMI1R4GMX3 469 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 CABIN1Q9Y6J0 2220 aa16.4■□□□□ 0.22
CDKN1A-201ENST00000244741 SLC5A10A0PJK1 596 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 OR7A17O14581 309 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 HNRNPRO43390 633 aaKnown RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 GALR2O43603 387 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 TPST1O60507 370 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 CAPN1P07384 714 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 NELFEP18615 380 aaKnown RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 SOX11P35716 441 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 ARL1P40616 181 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 PCBP2Q15366 365 aaKnown RBP eCLIP16.39■□□□□ 0.211e-22■■■■□ 26.5
CDKN1A-201ENST00000244741 ZNF528Q3MIS6 628 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 ATP6AP1LQ52LC2 224 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 NHSL2Q5HYW2 709 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 FRA10AC1Q70Z53 315 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 LINC00615Q96LM1 132 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 HBEGFQ99075 208 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 ALG2Q9H553 416 aa16.39■□□□□ 0.21
CDKN1A-201ENST00000244741 PRDM8Q9NQV8 689 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms